New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4905822	61 (1.040)	3 (0.050)	3/248	NT	5.3%	coding (201/489 nt)	PP_4314	hypothetical protein
	?	NC_002947	= 4905848	49 (0.870)					coding (175/489 nt)	PP_4314	hypothetical protein

ACAGGTGCGTACCACAGCGGCCACAGAAAGCACGCTGGGCCCAGTCGGACGAATCATAGACGCTGGGCGCACGCCCTTCGATCAGCGGAGGCTTGCTGCAGTGCACCACCAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4905707‑4905822 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcATGTGCCGCAAGTGGACCGGCGGCCCGCTGCTGGTGGTGCACTGCAGCAAGCCTCCGCTGATCGAAGGGCGTGCGCCCAGCGTCTATGATTCGTCCGACTGGGCCCAGCGTGCTTTCTGTGGCCGCTGTGGTACGCACCTGTACTA  <  NC_002947/4905848‑4905703                                                                                                                                                                                                                                                                        ACAGGTGCGTACCACAGCGGCCACAGAAAGCCCGCTGGGCCCAGTCGGACGAATAATAGACGCTGGGCGCACGCCCTTCGATCAGCGGAGGCTTGCTGCAGTGCACCACCAGCAGCATGTGCCGCAAGTGGACCGGCGGCCCGCTGCT                                                                                                                    <  4:260442/148‑1   AGGTGCGTACCACAGCGGCCACAGAAAGCACGCTGGGCCCAGTCGGACGAATCATAGACGCTGGGCGCACGCCCTTCGATCAGCGGAGGCTTGCTGCAGTGCACCACCAGCAGCATGTGCCGCAAGTGGCCCGGCGGCCCGCTGCTGGT                                                                                                                 <  7:60/149‑1    GGTGCGTACCACAGCGGCCACAGAAAGCACGCTGGGCCCAGTCGGACGAATCATAGACGCTGGGCGCACGCCCTTCGATCAGCGGAGGCTTGCTGCAGTGCACCACCAGCAGCATGTGCCGCAAGTGGACCGGCGGCCCGCTGCTGGTG                                                                                                                <  5:380349/149‑1                                                                                                                  AGCATGTGCCGCAAGTGGACCGGCGGCCCGCTGCTGGTGGTGCACTGCAGCAAGCCTCCGCTGATCGAAGGGCGTGCGCCCAGCGTCTATGATTCGTCCGACTGGGCCCAGCGTGCTTTCTGTGGCCGCTGTGGTACGCACCTGTACTA  >  4:218506/1‑149                                                                                                                                                                                                                                                                        ACAGGTGCGTACCACAGCGGCCACAGAAAGCACGCTGGGCCCAGTCGGACGAATCATAGACGCTGGGCGCACGCCCTTCGATCAGCGGAGGCTTGCTGCAGTGCACCACCAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4905707‑4905822 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcATGTGCCGCAAGTGGACCGGCGGCCCGCTGCTGGTGGTGCACTGCAGCAAGCCTCCGCTGATCGAAGGGCGTGCGCCCAGCGTCTATGATTCGTCCGACTGGGCCCAGCGTGCTTTCTGTGGCCGCTGTGGTACGCACCTGTACTA  <  NC_002947/4905848‑4905703

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.