| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4920753 | 65 (1.100) | 4 (0.070) | 4/248 | NT | 6.6% | coding (1162/2682 nt) | PP_4330 | toxin‑like protein |
| ? | NC_002947 | = 4920795 | 50 (0.880) | coding (1204/2682 nt) | PP_4330 | toxin‑like protein | |||||
CCAAACTGACCGGGGATATGTTCGCAGCCCTGACCGAGCGCCAGCGCCAGCGCAGCTATGACGATGCCGATTTTGTCATCACCACCGACAGCCAGGTTACCAAAGCCAAATGGCGAGGCTACCTCACCAATACGCTCAACCTGCTAGCGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4920601‑4920753‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacCGAGCGCCAGCAGTGGCGCCAGCCCCGGCACCACCAGGCACAGTGGCGCTAGCAGG < NC_002947/4920795‑4920740 CCAAACTGACCGGGGATATGTTCGCAGCCCTGACCGAGCGCCAGCGCCAGCGCAGCTATGACGATGCCGATTTTGTCATCACCACCGACAGCCAGGTTACCAAAGCCAAATGGCGAGGCTACCTCACCAATACGCTCAACCTGCTAGCG > 2:5045/1‑149CCAAACTGACCGGGGATATGTTCGCAGCCCTGACCGAGCGCCAGCGCCAGCGCAGCTATGACGATGCCGATTTTGTCATCACCACCGACAGCCAGGTTACCAAAGCCAAATGGCGAGGCTACCTCACCAATACGCTCAACCTGCTAGCG > 8:343943/1‑149 ACTGACCGGGGATATGTTCGCAGCCCTGACCGAGCGCCAGCGCCAGCGCAGCTATGACGATGCCGATTTTGTCATCTCCACCGACAGCCAGGTTACGAAAGCCAAATGGCGAGGCTACCTCACCAATACGCTCAACCTGCTAGCGCCAC < 4:190660/149‑1 TTCGCAGCCCTGACCGAGCGCCAGCGCCAGCGCAGCTATGACGATGCCGATTTTGTCATCACCACCGACAGCCAGGTTACCAAAGCCAAATGGCGAGGCTACCTCACCAATACGCTCAACCTGCTAGCGCCACCGAGCGCCAGCAGTGG > 4:188893/1‑149 ACGATGCCGATTTTGTCATCACCACCGACAGCCAGGTTACCAAAGCCAAATGGCGAGGCTACCTCACCAATACGCTCAACCTGCTAGCGCCACCGAGCGCCAGCAGTGGCGCCAGCCCCGGCACCACCAGGCACAGTGGCGCTAGCAG < 3:188893/148‑1 CAGCCAGGTTACCAAAGCCAAATGGCGAGGCTACCTCACCAATACGCTCAACCTGCTAGCGCCACCGAGCGCCAGCAGTGGCGCCAGCCCCGGCACCACCAGGCACAGTGGCGCTAGCAGG < 7:170319/121‑1 CAGCCAGGTTACCAAAGCCAAATGGCGAGGCTACCTCACCAATACGCTCAACCTGCTAGCGCCACCGAGCGCCAGCAGTGGCGCCAGCCCCGGCACCACCAGGCACAGTGGCGCTAGCAGG > 8:170319/1‑121 CCAAACTGACCGGGGATATGTTCGCAGCCCTGACCGAGCGCCAGCGCCAGCGCAGCTATGACGATGCCGATTTTGTCATCACCACCGACAGCCAGGTTACCAAAGCCAAATGGCGAGGCTACCTCACCAATACGCTCAACCTGCTAGCGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4920601‑4920753‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacCGAGCGCCAGCAGTGGCGCCAGCCCCGGCACCACCAGGCACAGTGGCGCTAGCAGG < NC_002947/4920795‑4920740 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |