| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5107942 | 50 (0.850) | 3 (0.050) | 3/246 | NT | 5.8% | coding (170/3021 nt) | ydiJ | putative oxidoreductase |
| ? | NC_002947 | = 5107965 | 50 (0.890) | coding (147/3021 nt) | ydiJ | putative oxidoreductase | |||||
TGTTCATGTGCCGCGACAGGTCGACGACGATACCGTCGGTCAGCGACTGGCCGTTGGTGCCGGTGCCACCACCGCGCGGGGTCAGCTTGACCTGCTGGAAGCGCGGCTCGCCCATCAGCGTGGCGACCCGCGCCACATCGTCGGCATCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5107790‑5107942‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcgCTTGCCGCAGGCGGCGGTGTTCCCGCTGGATGCCGACGATGTGGCGCGGGTCGCCACGCTGATGGGCGAGCCGCGCTTCCAGCAGGTCAAGCTGACCCCGCGCGGTGGTGGCACCGGCACCAACGGCCAGTCGCTGACCGACGG < NC_002947/5107965‑5107822 TGTTCATGTGCCGCGACAGGTCGACGACGATACCGTCGGTCAGCGACTGGCCGTTGGTGCCGGTGCCACCACCGCGCGGGGTCAGCTTGACCTGCTGGAAGCGCGGCTCGCCCATCAGCGTGGCGACCCGCGCCACATCGTCGGCATCC > 2:202618/1‑149 TCATGTGCCGCGACAGGTCGACGACGATACCGTCGGTCAGCGACTGGCCGTTGGTGCCGGTGCCACCACCGCGCGGGGTCAGCTTGACCTGCTGGAAGCGCGGCTCGCCCATCAGCGTGGCGACCCGCGCCACATCGTCGGCATCCAGC > 4:63568/1‑149 GGTCAGCGACTGGCCGTTGGTGCCGGTGCCACCACCGCGCGGGGTCAGCTTGACCTGCTGGAAGCGCGGCTCGCCCATCAGCGTGGCGACCCGCGCCACATCGTCGGCATCCAGCGCTTGCCGCAGGCGGCGGTGTTCCCGCTGGATGC < 7:30258/149‑1 ACTGGCCGTTGGTGCCGGTGCCACCACCGCGCGGGGTCAGCTTGACCTGCTGGAAGCGCGGCTCGCCCATCAGCGTGGCGACCCGCGCCACATCGTCGGCATCCAGCGCTTGCCGCAGGCGGCGGTGTTCCCGCTGGA < 7:205814/138‑1 ACTGGCCGTTGGTGCCGGTGCCACCACCGCGCGGGGTCAGCTTGACCTGCTGGAAGCGCGGCTCGCCCATCAGCGTGGCGACCCGCGCCACATCGTCGGCATCCAGCGCTTGCCGCAGGCGGCGGTGTTCCCGCTGGA > 8:205814/1‑138 CCAGCGCTTGCCGCAGGCGGCGGTGTTCCCGCTGGATGCCGACGATGTGGCGCGGGTCGCCACGCTGATGGGCGAGCCGCGCTTCCAGCAGGTCAAGCTGACCCCGCGCGGTGGTGGCACCGGCACCAACGGCCAGTCGCTGACCGACG > 8:38900/1‑149 CAGCGCTTGCCGCAGGCGGCGGTGTTCCCGCTGGATGCCGACGATGTGGCGCGGGTCGCCACGCTGATGGGCGAGCCGCGCTTCCAGCAGGTCAAGCTGACCCCGCGCGGTGGTGGCACCGGCACCAACGGCCAGTCGCTGACCGACGG > 3:210791/1‑149 CAGCGCTTGCCGCAGGCGGCGGTGTTCCCGCTGGATGCCGACGATGTGGCGCGGGTCGCCACGCTGATGGGCGAGCCGCGCTTCCAGCAGGTCAAGCTGACCCCGCGCGGTGGTGGCACCGGCACCAACGGCCAGTCGCTGACCGACGG > 5:50173/1‑149 CAGCGCTTGCCGCAGGCGGCGGTGTTCCCGCTGGATGCCGACGATGTGGCGCGGGTCGCCACGCTGATGGGCGAGCCGCGCTTCCAGCAGGTCAAGCTGACCCCGCGCGGTGGTGGCACCGGCACCAACGGCCAGTCGCTGACCGACGG > 7:145801/1‑149 TGTTCATGTGCCGCGACAGGTCGACGACGATACCGTCGGTCAGCGACTGGCCGTTGGTGCCGGTGCCACCACCGCGCGGGGTCAGCTTGACCTGCTGGAAGCGCGGCTCGCCCATCAGCGTGGCGACCCGCGCCACATCGTCGGCATCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5107790‑5107942‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcgCTTGCCGCAGGCGGCGGTGTTCCCGCTGGATGCCGACGATGTGGCGCGGGTCGCCACGCTGATGGGCGAGCCGCGCTTCCAGCAGGTCAAGCTGACCCCGCGCGGTGGTGGCACCGGCACCAACGGCCAGTCGCTGACCGACGG < NC_002947/5107965‑5107822 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |