New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5273028	43 (0.730)	3 (0.050)	3/244	NT	6.1%	coding (175/1125 nt)	rlmG	ribosomal RNA large subunit methyltransferase G
	?	NC_002947	= 5273084	51 (0.920)					coding (231/1125 nt)	rlmG	ribosomal RNA large subunit methyltransferase G

ACGCCGAACTCGACCTGATCCGCCAGCCGGAGCAGGCCAACGACCCGTTGCAGGCCTTCGATGCCGCCGACGAGTACCTGCTTGCGCAGCTACACGATCAGGCACCCGACGCCAATTGCCGGGTACTGGTGCTCAATGACAGCTTCGGTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5272876‑5273028 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcccCAGGTGCGAGTCACCGCTGCTGACCACCTGCAGCTGGCCTGCAAGGCTTGCGGCCAGGGCACCGAAGCTGTCATTGAGCACCAGTACCCGGCAATTGGCGTCGGGTGCCTGATCGTGTAGCTGCGCAAGCAGGTACTCGTCGGCGGCA  <  NC_002947/5273084‑5272937                                                                                                                                                                                                                                                                                                               ACGCCGAACTCGACCTGATCCGCCAGCCGGAGCAGGCCAACGACCCGTTGCAGGCCTTCGATGCCGCCGACGAGTACCTGCTTGCGCAGCTACACGATCAGGCACCCGACGCCAATTGCCGGGTACTGGTGCTCAATGACAGCTTCGGT                                                                                                                                                          >  6:147948/1‑149   GCCGAACTCGACCTGATCCGCCAGCCGGAGCAGGCCAACGACCCGTTGCAGGCCTTCGATGCCGCCGACGAGTACCTGCTTGCGCAGCTACACGATCAGGCACCCGACGCCAATTGCCGGGTACTGGTGCTCAATGACAGCTTCGGTGC                                                                                                                                                        >  6:4800/1‑149                                                        CTTCGATGCCGCCGACGAGTACCTGCTTGCGCAGCTACACGATCAGGCACCCGACGCCAATTGCCGGGTACTGGTGCTCAATGACAGCTTCGGTGCCCCAGGTGCGAGTCACCGCTGCTGACCACCTGCAGCTGGCCTGCAAGGCTTGC                                                                                                   >  4:213039/1‑149                                                                       CGAGTACCTGCTTGCGCAGCTACACGATCAGGCACCCGACGCCAATTGCCGGGTACTGGTGCTCAATGACAGCTTCGGTGCCCCAGGTGCGAGTCACCGCTGCTGACCACCTGCAGCTGGCCTGCAAGGCTTGCGGCCAGGGCACCGAA                                                                                    <  3:213039/149‑1                                                                        gacTACCTGCTTGCGCAGGTACACGATCAGGCACCCGACGGCAATTGCCGGGTACTGGTGCTCAATGACAGCTTCGGTGCCCCAGGTGCGTGTCACCGCTGCTGACCACCTGCAGCTGGCCTGCAAGGCTTGCGGCCAGGGCACCGAAG                                                                                   <  8:130664/146‑1                                                                                                                                                   GGTGCCCCAGGTGCGAGTCACCGCTGCTGACCACCTGCAGCTGGCCTGCAAGGCTTGCGGCCAGGGCACCGAAGCTGTCATTGAGCACCAGTACCCGGCAATTGGCGTCGGGTGCCTGATCGTGTAGCTGCGCAAGCAGGTACTCGTCG        >  5:147948/1‑149                                                                                                                                                        CCCAGGTGCGAGTCACCGCTGCTGACCACCTGCAGCTGGCCTGCAAGGCTTGCGGCCAGGGCACCGAAGCTGTCATTGAGCACCAGTACCCGGCAATTGGCGTCGGGTGCCTGATCGTGTAGCTGCGCAAGCAGGTACTCGTCGGCGG    >  3:310810/1‑148                                                                                                                                                         CCAGGTGCGAGTCACCGCTGCTGACCACCTGCAGCTGGCCTGCAAGGCTTGCGGCCAGGGCACCGAAGCTGTCATTGAGCACCAGTACCCGGCAATTGGCGTCGGGTGCCTGATCGTGTAGCTGCGCAAGCAGGTACTCGTCGGCGGCA  >  3:72635/1‑149                                                                                                                                                                                                                                                                                                               ACGCCGAACTCGACCTGATCCGCCAGCCGGAGCAGGCCAACGACCCGTTGCAGGCCTTCGATGCCGCCGACGAGTACCTGCTTGCGCAGCTACACGATCAGGCACCCGACGCCAATTGCCGGGTACTGGTGCTCAATGACAGCTTCGGTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5272876‑5273028 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcccCAGGTGCGAGTCACCGCTGCTGACCACCTGCAGCTGGCCTGCAAGGCTTGCGGCCAGGGCACCGAAGCTGTCATTGAGCACCAGTACCCGGCAATTGGCGTCGGGTGCCTGATCGTGTAGCTGCGCAAGCAGGTACTCGTCGGCGGCA  <  NC_002947/5273084‑5272937

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.