| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5306320 | 45 (0.760) | 3 (0.060) | 3/238 | NT | 6.7% | coding (932/3483 nt) | recC | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit |
| ? | NC_002947 | = 5306376 | 42 (0.770) | coding (876/3483 nt) | recC | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit | |||||
TCGTCCTGCAGTTCGTTGAGCAGCGTGGTGGGCGAACCGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5306164‑5306320‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcaacgCAAGCAAGGCATGCCCCTGCAACTGGACGACCAGACGCTGCACCAGCATGCCCACCCGTTGCTGGCAGCCTGGGGTAAACAAGGCCGCGACTACATCAACCTGCTCGACAGCTATGATGACCCAGGCAGCTACCAGGGCGT < NC_002947/5306376‑5306236 TCGTCCTGCAGTTCGTTGAGCAGCGTGGTGGGCGAACCGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGC < 5:373869/149‑1 CGTCCTGCAGTTCGTTGAGCAGCGTGGTGGGCGAACCGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGC > 5:159846/1‑148 GTCCTGCAGTTCGTTGAGCAGCGTGGTGGGCGAACCGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCA < 7:47437/149‑1 GTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGCAAGCAAGGCATGCCCCTGCAACTGGACGACCAGACGCTGCA > 4:277269/1‑149 ACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGCAAGCAAGGCATGCCCCTGCAACTGGACGACCAGACGCTGCACCAGCATGCCCACCCGTTGCTG < 3:277269/149‑1 CGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGCAAGCAAGGCATGCCCCTGCAACTGGACGACCAGACGCTGCACCAGCATGCCCACCCGTTGCTGG < 7:156769/149‑1 GCCAGCAACGCAAGCAAGGCATGCCCCTGCAACTGGACGACCAGACGCTGCACCAGCATGCCCACCCGTTGCTGGCAGCCTGGGGTAAACAAGGCCGCGACTACATCAACCTGCTCGACAGCTATGATGACCCAGGCAGCTACCAGGGC > 1:107043/1‑149 GCCAGCAACGCAAGCAAGGCATGCCCCTGCAACTGGACGACCAGACGCTGCACCAGCATGCCCACCCGTTGCTGGCAGCCTGGGGTAAACAAGGCCGCGACTACATCAACCTGCTCGACAGCTATGATGACCCAGGCAGCTACCAGGGC > 7:219782/1‑149 GCCAGCAACGCAAGCAAGGCATGCCCCTGCAACTGGACGACCAGACGCTGCACCAGCATGCCCACCCGTTGCT < 7:61721/73‑1 GCCAGCAACGCAAGCAAGGCATGCCCCTGCAACTGGACGACCAGACGCTGCACCAGCATGCCCACCCGTTGCT > 8:61721/1‑73 CAGCAACGCAAGCAAGGCATGCCCCTGCAACTGGACGACCAGACGCTGCACCAGCATGCCCACCCGTTGCTGGCAGCCTGGGGTAAACAAGGCCGCGACTACATCAACCTGCTCGACAGCTATGATGACCCAGGCAGCTACCAGGGCGT < 1:327549/149‑1 TCGTCCTGCAGTTCGTTGAGCAGCGTGGTGGGCGAACCGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5306164‑5306320‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcaacgCAAGCAAGGCATGCCCCTGCAACTGGACGACCAGACGCTGCACCAGCATGCCCACCCGTTGCTGGCAGCCTGGGGTAAACAAGGCCGCGACTACATCAACCTGCTCGACAGCTATGATGACCCAGGCAGCTACCAGGGCGT < NC_002947/5306376‑5306236 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |