New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 530632045 (0.760)3 (0.060) 3/238 NT 6.7% coding (932/3483 nt) recC multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
?NC_002947 = 5306376 42 (0.770)coding (876/3483 nt) recC multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit

ACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGCACAGCAATACCTGACTGAAACGCGACAGGCCTGCCAGTGCTTCCAGGGCCTGGGCCGGCAG  >  NC_002947/5306236‑5306522
                                                                                                                                            |                                                                                                                                                   
acGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGcgttgctg                                                                                                                                             <  1:327549‑M2/149‑9 (MQ=255)
  gCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGcgttgctggc                                                                                                                                           >  7:219782‑M2/1‑139 (MQ=255)
  gCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGcgttgctggc                                                                                                                                           >  1:107043‑M2/1‑139 (MQ=255)
    ccTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGt                                                                                                                                        <  6:93391/149‑1 (MQ=255)
    ccTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGt                                                                                                                                        <  5:220125/149‑1 (MQ=255)
        gTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTg                                                                                                                                     >  5:342541/1‑148 (MQ=255)
           gCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTAc                                                                                                                                  <  3:111165/148‑1 (MQ=255)
           gCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACt                                                                                                                                 <  1:288241/149‑1 (MQ=255)
             tGCCTGGGTCATCATAGCTGTCGAGCAGGGTGATGTAGTCGCGGCCTTGTTTACCCCAGGATGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACtgg                                                                                                                               >  3:87350/1‑149 (MQ=255)
              gCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACtggt                                                                                                                              >  1:329260/1‑149 (MQ=255)
                        tcatAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAg                                                                                                                    >  1:64333/1‑149 (MQ=255)
                         catAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAgg                                                                                                                   >  6:242077/1‑149 (MQ=255)
                                 tCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTg                                                                                                             <  5:242077/147‑1 (MQ=255)
                                 tCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTg                                                                                                             <  6:342541/147‑1 (MQ=255)
                                 tCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTc                                                                                                           <  2:64333/149‑1 (MQ=255)
                                   gAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCgg                                                                                                         >  3:328115/1‑149 (MQ=255)
                                     gCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACtggtg                                                                                                                             >  4:277202/1‑127 (MQ=255)
                                     gCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACtggtg                                                                                                                             <  3:277202/127‑1 (MQ=255)
                                         gTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTc                                                                                                           >  3:218875/1‑141 (MQ=255)
                                         gTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTc                                                                                                           <  4:218875/141‑1 (MQ=255)
                                               gTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAgg                                                                                                                   >  7:239875/1‑127 (MQ=255)
                                               gTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAgg                                                                                                                   <  8:239875/127‑1 (MQ=255)
                                                     gcgGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTCTCGGCAACGATATCGGCCCAgt                                                                                       >  5:211163/1‑149 (MQ=255)
                                                           ttGTTTACACCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTggc                                                                                 >  5:360444/1‑149 (MQ=255)
                                                                  ccccAGGCTGCCAGCAACGGGTGGGCATGCTGGTTCAGCGTCTGGTCGTCCAGTTGCAGTGGCATGCATTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGTTATCGGCCCAGTGGTGGCGGCATg                                                                           <  6:75155/148‑1 (MQ=255)
                                                                     cAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGtt                                                                       <  6:211163/149‑1 (MQ=255)
                                                                       ggCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTtgt                                                                     <  4:328115/149‑1 (MQ=255)
                                                                            ccAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGcgttgctggcagcctggggtaaacaaggccgcgactacatcaacctgctcgacagctatgatgacccaggcagctaccagggcg                                                                 <  7:156769‑M2/149‑85 (MQ=255)
                                                                             cAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGcgttgctggcagcctggggtaaacaaggccgcgactacatcaacctgctcgacagctatgatgacccaggcagctaccagggcgt                                                                <  3:277269‑M2/149‑86 (MQ=255)
                                                                              aGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGcgttgctggc                                                                                                                                           <  7:61721‑M2/73‑11 (MQ=255)
                                                                              aGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGcgttgctggc                                                                                                                                           >  8:61721‑M2/1‑63 (MQ=255)
                                                                               gCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGcac                                                             <  2:327549/149‑1 (MQ=255)
                                                                                cAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGcaca                                                            <  2:363727/149‑1 (MQ=255)
                                                                                cAACGGCTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGCGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGTTTTCGGACCAGTGGTGTCGGCATGGGGTGTGTACGca                                                              <  4:87350/147‑1 (MQ=255)
                                                                                      gTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTgtgt                                                                   <  8:345689/136‑1 (MQ=255)
                                                                                      gTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTgtgt                                                                   >  7:345689/1‑136 (MQ=255)
                                                                                         ggCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGCACAGCAATACct                                                   >  1:347830/1‑149 (MQ=255)
                                                                                                   tGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGcgttgctggcagcctggggtaaacaaggccgcgactacatcaacctgctcgacagctatgatgacccaggcagctaccagggcgtgttcagcgacggccgcatcgac                                          >  4:277269‑M2/1‑42 (MQ=255)
                                                                                                      aGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGCACAGCAATACCTGACTGAAACGCGa                                      <  6:360444/149‑1 (MQ=255)
                                                                                                       gCGTCTGGTCGTCCAGGTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACGGGTGGCGCAACCGGTCGGTGGCGGCATCGCTATCGGGCGAGTGGTGGCGGGAGGGGGTGTGTGAGGGCAGGAATAGCGGACTGAAACGCGAc                                     >  4:257257/1‑149 (MQ=255)
                                                                                                            tGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCAGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGCACAGCAATACCTGACTGAAACGCGACAGGc                                 >  1:257261/1‑149 (MQ=255)
                                                                                                                cgtcCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGCACAGCa                                                         >  7:163447/1‑120 (MQ=255)
                                                                                                                cgtcCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGCACAGCa                                                         <  8:163447/120‑1 (MQ=255)
                                                                                                                 gtcCAGGTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGCACAGCAATACCTGACTGAAACGCGACAGGCCTGc                             >  4:253842/1‑147 (MQ=255)
                                                                                                                    cAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCGTTGTCGGCAACGATATCGGCCCAGTGGGGGCGGCATGGGTTGTGTACGCACGGCAAGACCTGGCTGAAACGCGCCAGGCCTGCCAGTg                        >  2:123810/1‑149 (MQ=255)
                                                                                                                    cAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGCACAGAAATACGTGACTGAAACGCGACAGGCCTGCCAGTg                        >  8:352999/1‑149 (MQ=255)
                                                                                                                    cAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGAACAGCAATACCTGACTGAAACGCGACAGGCCTGCCAGTg                        >  4:16851/1‑149 (MQ=255)
                                                                                                                      gTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGCACAGCAATACCTGACTGAAACGCGACAGGCCTGCCAGTGCt                      >  5:243874/1‑149 (MQ=255)
                                                                                                                            ggggCATGCCTCGCTTGCGTTGCTGGCGTGTGTACTGTTTGCTCAACAGGTCCTTTTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGCACAGCAATACCTGACTGAAACGCGACAGGCCTTCCAGTGCTTCCAgg                <  3:257257/149‑1 (MQ=255)
                                                                                                                             gggCATGCGTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCGACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGCACCGCAATACCTGACTGAAACGCGACAGGCCGGCCAGTGCTTGCAggg               >  2:244472/1‑149 (MQ=255)
                                                                                                                              ggCATGCGTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCGACGATGTCGGCCCAGTGGTGGGGGCATGGGTTGTGGACGCCCAGCAATACCGGGCGGACGCGCGACAGGCCGGCCAGTGCGTCCCGGGc              >  8:150778/1‑149 (MQ=255)
                                                                                                                                    ccTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTtgtg                                                                    <  7:171208/89‑1 (MQ=255)
                                                                                                                                    ccTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTtgtg                                                                    >  8:171208/1‑89 (MQ=255)
                                                                                                                                         cttgcGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGCACAGCAATACCTGACTGAAACGCGACAGGCCTGCCAGTGCTTCCAGGGCCTGGGCCGGCa   <  2:329260/149‑1 (MQ=255)
                                                                                                                                          ttgcGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGCACAGCAATACCTGACTGAAACGCGACAGGCCTGCCAGTGCTTCCAGGGCCTGGGCCGGCAg  >  2:150785/1‑149 (MQ=255)
                                                                                                                                           tgcGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGCACAGCAATACCTGACTGAAACGCGACAGGCCTGCCAGTGCTTCCAGGGc              <  7:187893/136‑1 (MQ=255)
                                                                                                                                           tgcGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGCACAGCAATACCTGACTGAAACGCGACAGGCCTGCCAGTGCTTCCAGGGc              >  8:187893/1‑136 (MQ=255)
                                                                                                                                            |                                                                                                                                                   
ACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCCTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGCACAGCAATACCTGACTGAAACGCGACAGGCCTGCCAGTGCTTCCAGGGCCTGGGCCGGCAG  >  NC_002947/5306236‑5306522

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.