| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5380510 | 48 (0.820) | 3 (0.050) | 3/248 | NT | 5.8% | coding (92/405 nt) | fur | ferric iron uptake global transcriptional repressor Fur |
| ? | NC_002947 | = 5380557 | 52 (0.920) | coding (45/405 nt) | fur | ferric iron uptake global transcriptional repressor Fur | |||||
CAGCTCGAACACTGCATGACCGCCGTCGAAGTTGTGGCGAACCACCAGACCCGCCGCCTCGAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5380359‑5380510‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgacCCTGCCTCGAGTCAAGATCCTTCAGATGCTCGACTCTACCGAGCAGCGTCACATGAGTGCAGAGGATGTCTACAAGGCGCTGATGGAGGCTGGCGAGGATGTAGGCCTGGCCACCGTCTATCGCGTGCTGACCCAGTTCGAGGCGGCG < NC_002947/5380557‑5380410 CAGCTCGAACACTGCATGACCGCCGTCGAAGTTGTGGCGAACCACCAGACCCGCCGCCTCGAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGT < 4:363538/149‑1 GCTCGAACACTGCATGACCGCCGTCGAAGTTGTGGCGAACCACCAGACCCGCCGCCTCGAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGTGA < 8:113130/149‑1 TCGAACACTGCATGACCGCCGTCGAAGTTGTGGCGAACCACCAGACCCGCCGCCTCGAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGTGAC > 3:112365/1‑148 GAACACTGCATGACCGCCGTCGAAGTTGTGGCGAACCACCAGACCCGCCGCCTCGAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGTGAC < 4:112365/146‑1 CACCAGACCCGCCGCCTCGAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGTGACCCTGCCTCGAGTCAAGATCCTTCAGATGCTCGACTCTAC > 4:124972/1‑149 GCCTCGAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGTGACCCTGCCTCGAGTCAAGATCCTTCAGATGCTCGACTCTACCGAGCAGCGTCAC < 3:124972/149‑1 CCTCGAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGTG > 3:86729/1‑94 CCTCGAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGTG < 4:86729/94‑1 GAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTTCACTCATGTGACCCTGCCTCGAGTCAAGATCCTTCAGATGCTCGACTCTACCGAGCAGCGTCACATGA < 6:267817/148‑1 CCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATG < 1:323288/47‑1 CCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATG > 2:323288/1‑47 CCCTGCCTCGAGTCAAGATCCTTCAGATGCTCGACTCTACCGAGCAGCGTCACATGAGTGCAGAGGATGTCTACAAGGCGCTGATGGAGGCTGGCGAGGATGTAGGCCTGGCCACCGTCTATCGCGTGCTGACCCAGTTCGAGGCGGCG < 5:206229/149‑1 CAGCTCGAACACTGCATGACCGCCGTCGAAGTTGTGGCGAACCACCAGACCCGCCGCCTCGAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5380359‑5380510‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgacCCTGCCTCGAGTCAAGATCCTTCAGATGCTCGACTCTACCGAGCAGCGTCACATGAGTGCAGAGGATGTCTACAAGGCGCTGATGGAGGCTGGCGAGGATGTAGGCCTGGCCACCGTCTATCGCGTGCTGACCCAGTTCGAGGCGGCG < NC_002947/5380557‑5380410 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |