| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5474528 = | 49 (0.830) | 3 (0.050) | 3/244 | NT | 5.8% | coding (267/1272 nt) | proA | gamma‑glutamyl phosphate reductase |
| ? | NC_002947 | 5474579 = | 51 (0.920) | coding (216/1272 nt) | proA | gamma‑glutamyl phosphate reductase | |||||
CGCCGACGCGCTGGATGCTGCCCGTGCCGAGCTCACCGCTGCCAACGAGCTGGACCTGGCCGCCGGCCGCGCCAGTGGCCTGGAGCCCGCACTGCTCGATCGTCTGGCGCTGACCCCGGCGCGTATCGACGGCATGATCACCGGCTTGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5474681‑5474528‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccagACGATCGAGCAGTGCGGGCTCCAGGCCACTGGCGCGGCCGGCGGCCAGGTCCAGCTCGTTGGCAGCGGTGAGCTCGGCACGGGCAGCATCCAGCGCGTCGGCGGCGGCTTGCAGGGCGCGGTTCTTCTGCGCGGTGCTGGCACGGC > NC_002947/5474579‑5474724 CGCCGACGCGCTGGATGCTGCCCGTGCCGAGCTCACCGCTGCCAACGAGCTGGACCTGGCCGCCGGCCGCGCCAGTGGCCTGGAGCCCGCACTGCTCGATCGTCTGGCGCTGACCCCGGCGCGTATCGACGGCATGATCACCGGCTTGC > 6:378378/1‑149 CCGACGCGCTGGATGCTGCCCGTGCCGAGCTCACCGCTGCCAACGAGCTGGACCTGGCCGCCGGCCGCGCCAGTGGCCTGGAGCCCGCACTGCTCGATCGTCTGGCGCTGACCCCGGCGCGTATCGACGGCATGATCACCGGCTTGCGC < 2:274291/149‑1 ACGCGCTGGATGCTGCCCGTGCCGAGCTCACCGCTGCCAACGAGCTGGACCTGGCCGCCGGCCGCGCCAGTGGCCTGGAGCCCGCACTGCTCGATCGTCTGGCGCTGACCCCGGCGCGTATCGACGGCATGATCACCGGCTTGCGCCAG > 3:328807/1‑149 TGGATGCTGCCCGTGCCGAGCTCACCGCTGCCAACGAGCTGGACCTGGCCGCCGGCCGCGACAGTGGCCTGGAGCCCGCACTGCTCGATCGTCTGGCGCTGACCCCGGCGCGTATCGACGGCATGATCACCGGCTTGCGCCAG > 1:218860/1‑143 TGGATGCTGCCCGTGCCGAGCTCACCGCTGCCAACGAGCTGGACCTGGCCGCCGGCCGCGACAGTGGCCTGGAGCCCGCACTGCTCGATCGTCTGGCGCTGACCCCGGCGCGTATCGACGGCATGATCACCGGCTTGCGCCAG < 2:218860/143‑1 TCTGGCGCTGACCCCGGCGCGTATCGACGGCATGATCACCGGCTTGCGCCAGACGATCGAGCAGTGCGGGCTCCAGGCCACTGGCGCGGCCGGCGGCCAGGTCCAGCTCGTTGGCAGCGGTGAGCTCGGCACGGGCAGCATCCAGCGCG > 6:49973/1‑149 CTGGCGCTGACCCCGGCGCGTATCGACGGCATGATCACCGGCTTGCGCCAGACGATCGAGCAGTGCGGGCTCCAGGCCACTGGCGCGGCCGGCGGCCAGGTCCAGCTCGTTG < 5:68920/112‑1 CTGGCGCTGACCCCGGCGCGTATCGACGGCATGATCACCGGCTTGCGCCAGACGATCGAGCAGTGCGGGCTCCAGGCCACTGGCGCGGCCGGCGGCCAGGTCCAGCTCGTTG > 6:68920/1‑112 CAGACGATCGAGCAGTGCGGGCTCCAGGCCACTGGCGCGGCCGGCGGCCAGGTCCAGCTCGTTGGCAGCGGTGAGCTCGGCACGGGCAGCATCCAGCGCGGCGGCGGCGGCTTGCAGGGCGCGGTTCTTCTGCGCGGTGCTGGCACGGC < 3:240962/149‑1 CGCCGACGCGCTGGATGCTGCCCGTGCCGAGCTCACCGCTGCCAACGAGCTGGACCTGGCCGCCGGCCGCGCCAGTGGCCTGGAGCCCGCACTGCTCGATCGTCTGGCGCTGACCCCGGCGCGTATCGACGGCATGATCACCGGCTTGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5474681‑5474528‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccagACGATCGAGCAGTGCGGGCTCCAGGCCACTGGCGCGGCCGGCGGCCAGGTCCAGCTCGTTGGCAGCGGTGAGCTCGGCACGGGCAGCATCCAGCGCGTCGGCGGCGGCTTGCAGGGCGCGGTTCTTCTGCGCGGTGCTGGCACGGC > NC_002947/5474579‑5474724 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |