| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5637686 | 46 (0.780) | 3 (0.050) | 3/244 | NT | 6.7% | coding (220/1443 nt) | PP_4949 | TldD/PmbA family peptidase |
| ? | NC_002947 | = 5637741 | 40 (0.720) | coding (275/1443 nt) | PP_4949 | TldD/PmbA family peptidase | |||||
CCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGGGCGCCATGCTCACCGTGCGGGTCAATGGCGTGGAGGCCTACGCTGCCACCGCCGACCTGTCCCAGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5637534‑5637686‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggctgTGCCGGGCGATCTGCCGCGCCAGCGCCTCGGCTTGCTCAAGGGCGCGCTGCAGGCCAGCCTGGGACAGGTCGGCGGTGGCAGCGTAGGCCTCCACGCCATTGACCCGCACGGTGAGCATGGCGCCCTCATCCTGGCTGAAGAAGGGT < NC_002947/5637741‑5637595 CCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGGGCGCCATGCTCACCGTGCGGGTCAATGGCGTGGAGGCCTACGCTGCCACCGCCGACCTGTCCCA < 5:283232/148‑1CCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGGGCGCCATGCTCACCGTGCGGGTCAATGGCGTGGAGGCCTACGCTGCCACCGCCGACCTGTCCCA < 6:183134/148‑1 CAGCCAGGATGAGGGCGCCATGCTCACCGTGCGGGTCAATGGCGTGGAGGCCTACGCTGCCACCGCCGACCTGTCCCAGGCTGTGCCGGGCGATCTGCCGCGCCAGCGCCTCGGCTTGCTCAAGGGCGCGCTGCAGGCCAGCCTGG < 8:226987/146‑1 CCAGGATGAGGGCGCCATGCTCACCGTGCGGGTCAATGGCGTGGAGGCCTACGCTGCCACCGCCGACCTGTCCC > 3:23572/1‑74 CCAGGATGAGGGCGCCATGCTCACCGTGCGGGTCAATGGCGTGGAGGCCTACGCTGCCACCGCCGACCTGTCCC < 4:23572/74‑1 TCACCGTGCGGGTGAATGGCGTGGAGGCCTACGCTGCCACCGCCGACCTGTCCCAGGCTGTGCCGGGCGATCTGCCGCGCCAGCGCCTCGGCTTGCTCAAGGGCGCGCTGCAGGCCAGCCTGGG > 4:191584/1‑124 TCACCGTGCGGGTCAATGGCGTGGAGGCCTACGCTGCCACCGCCGACCTGTCCCAGGCTGTGCCGGGCGATCTGCCGCGCCAGCGCCTCGGCTTGCTCAAGGGCGCGCTGCAGGCCAGCCTGGG < 3:191584/124‑1 GGCTGTGCCGGGCGATCTGCCGCGCCAGCGCCTCGGCTTGCTCAAGGGCGCGCTGCAGGCCAGCCTGGGACAGGTCGGCGGTGGCAGCGTAGGCCTCCACGCCATTGACCCGCACGGTGAGCATGGCGCCCTCATCCTGGCTGAAGAAG > 5:149517/1‑149 GCTGTGCCGGGCGATCTGCCGCGCCAGCGCCTCGGCTTGCTCAAGGGCGCGCTGCAGGCCAGCCTGGGACAGGTCGGCGGTGGCAGCGTAGGCCTCCACGCCATTGACCCGCACGGTGAGCATGGCGCCCTCATCCTGGCTGAAGAAGG > 6:360998/1‑149 GCTGTGCCGGGCGATCTGCCGCGCCAGCGCCTCGGCTTGCTCAAGGGCGCGCTGCAGGCCAGCCTGGGACAGGTCGGCGGTGGCAGCGTAG < 1:152451/91‑1 GCTGTGCCGGGCGATCTGCCGCGCCAGCGCCTCGGCTTGCTCAAGGGCGCGCTGCAGGCCAGCCTGGGACAGGTCGGCGGTGGCAGCGTAG > 2:152451/1‑91 TGTGCCGGGCGATCTGCCGCGCCAGCGCCTCGGCTTGCTCAAGGGCGCGCTGCAGGCCAGCCTGGGACAGGTCGGCGGTGGCAGCGTAGGCCTCCACGCCATTGACCCGCACGGTGAGCATGGCGCCCTCATCCTGGCTGAAGAAGGGT > 5:240027/1‑149 CCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGGGCGCCATGCTCACCGTGCGGGTCAATGGCGTGGAGGCCTACGCTGCCACCGCCGACCTGTCCCAGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5637534‑5637686‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggctgTGCCGGGCGATCTGCCGCGCCAGCGCCTCGGCTTGCTCAAGGGCGCGCTGCAGGCCAGCCTGGGACAGGTCGGCGGTGGCAGCGTAGGCCTCCACGCCATTGACCCGCACGGTGAGCATGGCGCCCTCATCCTGGCTGAAGAAGGGT < NC_002947/5637741‑5637595 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |