| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5818359 = | 50 (0.850) | 4 (0.070) | 3/240 | NT | 8.3% | coding (353/687 nt) | PP_5094 | PLP binding domain‑containing protein |
| ? | NC_002947 | 5818398 = | 42 (0.770) | coding (392/687 nt) | PP_5094 | PLP binding domain‑containing protein | |||||
TTCGCCGCTGACGTTCACCTGCAGGCAGATGTTCAGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5818399‑5818359‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagcggcgAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATGGCAATCCCGGAACCCACCGAAGACCGCGCCACCCAGGAGGCCGCCTTCGC > NC_002947/5818398‑5818539 TTCGCCGCTGACGTTCACCTGCAGGCAGTTGTTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATGGCAATCCCGGAACCCA > 1:206563/1‑149TTCGCCGCTGACGTTCACCTGCAGGCAGATGTTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATGGCAATCCCGGAACCCA > 6:91925/1‑149 CCGCTGACGTTCACCTGCAGGCAGATGTTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATG < 7:84171/129‑1 CCGCTGACGTTCACCTGCAGGCAGATGTTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATG > 8:84171/1‑129 AGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATGGCAATCCCGGAACCCACCGAAGACCGCGCCACCCAGGAGGCCGCCTTCGC > 2:9156/1‑149 TTCGCCGCTGACGTTCACCTGCAGGCAGATGTTCAGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5818399‑5818359‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagcggcgAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATGGCAATCCCGGAACCCACCGAAGACCGCGCCACCCAGGAGGCCGCCTTCGC > NC_002947/5818398‑5818539 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |