New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5818359 =	50 (0.850)	4 (0.070)	3/240	NT	8.3%	coding (353/687 nt)	PP_5094	PLP binding domain‑containing protein
	?	NC_002947	5818398 =	42 (0.770)					coding (392/687 nt)	PP_5094	PLP binding domain‑containing protein

TTCAGTCGAACAAGACCAAAGCCATCGCCGAGCATTTCGACTGGGTGCATTCCGTGGACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATGGCAATCCCGGAACCCACCGAAGACCGCGCCACCCAGGAGGCCGCCTTCGC  >  NC_002947/5818251‑5818539                                                                                                                                                     |                                                                                                                                              ttCAGTCGAACAAGACCTAAGCCTTCGCCGTGCATTTCGACTGGGTGCATTCCGTGGACCGGCTGAAAATTGC‑CCAACGGCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGaa                                                                                                                                              <  3:140147/149‑1 (MQ=255)  tgggttccgggattgccatcagcccgcgcaggcgcaggttgggcagtgcggctacggctttggccaacgcgggtaggtcggctggggtgcagccggatttactgtcttCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGaa                                                                                                                                              >  6:91925‑M1/109‑149 (MQ=255)  tgggttccgggattgccatcagcccgcgcaggcgcaggttgggcagtgcggctacggctttggccaacgcgggtaggtcggctggggtgcagccggatttactgtcttCGCCGCTGAACAACTGCCTGCAGGTGAACGTCAGCGGCGaa                                                                                                                                              >  1:206563‑M1/109‑149 (MQ=255)     gTCGAACAAGACCAAAGCCATCGCCGAGCATTTCGACTGGGTGCATTCCGTGGACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACa                                                                                                                                          <  5:263651/149‑1 (MQ=255)      tCGAACAAGACCAAAGCCATCGCCGAGCATTTCGACTGGGTGCATTCCGTGGACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGCCAg                                                                                                                                         >  7:171341/1‑149 (MQ=255)        gAACAAGACCAAAGCCATCGCCGAGCATTTCGACTGGGTGCATTCCGTGGACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGt                                                                                                                                        >  5:171326/1‑148 (MQ=255)            aaGACCAAAGCCATCGCCGAGCATTTCGACTGGGTGCATTCCGTGGACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATc                                                                                                                                   <  1:343723/149‑1 (MQ=255)            aaGACCAAAGCCATCGCCGAGCATTTCGACTGGGTGCATTCCGTGGACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATc                                                                                                                                   >  2:62654/1‑149 (MQ=255)              gACCAAAGCCATCGCCGAGCATTTCGACTGGGTGCATTCCGTGGACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAg                                                                                                                                         <  4:30591/141‑1 (MQ=255)              gACCAAAGCCATCGCCGAGCATTTCGACTGGGTGCATTCCGTGGACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAg                                                                                                                                         >  3:30591/1‑141 (MQ=255)              gACCAAAGCCATCGCCGAGCATTTCGACTGGGTGCATTCCGTGGACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCg                                                                                                                                 >  8:345843/1‑149 (MQ=255)                  aaaGCCATCGCCGAGCATTTCGACTGGGTGCATTCCGTGGACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTg                                                                                                                             >  7:42394/1‑149 (MQ=255)                        aTCGCCGAGCATTTCGACTGGGTGCATTCCGTGGACCGCCTGAAAATTGCGCCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCAccc                                                                                                                        >  1:278547/1‑149 (MQ=255)                                  aTTTCGACTGGGTGCATTCCGTGGACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCtc                                                                                                             >  3:90307/1‑148 (MQ=255)                                       gACTGGGTGCATTCCGTGGACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGaa                                                                                                                                              <  8:28412/111‑1 (MQ=255)                                         cTGGGTGCATTCCGTGGACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGt                                                                                                      <  2:216668/149‑1 (MQ=255)                                            ggTGCATTCCGTGGACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGAc                                                                                                                <  5:171010/136‑1 (MQ=255)                                            ggTGCATTCCGTGGACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGAc                                                                                                                >  6:171010/1‑136 (MQ=255)                                            ggTGCATTCCGTGGACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGtt                                                                                                     <  6:151803/147‑1 (MQ=255)                                            ggTGCATTCCGTGGACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTg                                                                                                    <  8:42394/148‑1 (MQ=255)                                                  ttCCGTGGACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCCGCACCCCAGCCGACCTACCCGCGTTGGc                                                                                                  <  7:323041/144‑1 (MQ=255)                                                  ttCCGTGGACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCAGCACCCCAGCCGACCTACCCGCGTTGGc                                                                                                  >  8:323041/1‑144 (MQ=255)                                                    ccGTGGACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGcc                                                                                           >  6:159908/1‑149 (MQ=255)                                                     cGTGGACCGCCTGAATATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGTCTGGCGCCGCTGAACATCTGGCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGcc                                                                                           <  5:253211/148‑1 (MQ=255)                                                     cGTGGACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCg                                                                                          >  4:133918/1‑149 (MQ=255)                                                         gACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAg                                                                                       <  6:171326/148‑1 (MQ=255)                                                         gACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGc                                                                                      <  1:62654/149‑1 (MQ=255)                                                              ccTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCAc                                                                                 <  3:133918/149‑1 (MQ=255)                                                                             aaCGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAAcctgcgc                                                                   <  2:130844/149‑1 (MQ=255)                                                                                 ccTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAAcctgcgcctgc                                                               <  5:159908/149‑1 (MQ=255)                                                                                  cTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAAcctgcgcctgcg                                                              <  2:278547/149‑1 (MQ=255)                                                                                     tCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCgg                                                           >  4:231009/1‑149 (MQ=255)                                                                                        gAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCt                                                        >  5:50377/1‑149 (MQ=255)                                                                                                 ccTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGt                                                                                                                                        <  4:326221/60‑1 (MQ=255)                                                                                                 ccTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGt                                                                                                                                        >  3:326221/1‑60 (MQ=255)                                                                                                 ccTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATgg                                                   <  8:119853/145‑1 (MQ=255)                                                                                                 ccTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATgg                                                   >  7:119853/1‑145 (MQ=255)                                                                                                 ccTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATGGCAAt                                               >  6:49954/1‑149 (MQ=255)                                                                                                   tGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTg                                                                                                    >  7:348387/1‑94 (MQ=255)                                                                                                   tGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTg                                                                                                    <  8:348387/94‑1 (MQ=255)                                                                                                      ggggCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCa                                                                                  <  7:321321/109‑1 (MQ=255)                                                                                                      ggggCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCa                                                                                  >  8:321321/1‑109 (MQ=255)                                                                                                            ttcgccgctgacgttcacctgcaggcagttgttcagcggcgAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATGGCAATCCCGGAACCCa                                    >  1:206563‑M2/42‑149 (MQ=255)                                                                                                            ttcgccgctgacgttcacctgcaggcagatgttcagcggcgAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATGGCAATCCCGGAACCCa                                    >  6:91925‑M2/42‑149 (MQ=255)                                                                                                                ccgctgacgttcacctgcaggcagatgttcagcggcgAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATg                                                    >  8:84171‑M2/38‑129 (MQ=255)                                                                                                                ccgctgacgttcacctgcaggcagatgttcagcggcgAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATg                                                    <  7:84171‑M2/92‑1 (MQ=255)                                                                                                                               ctgcAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATGGCAATCCCGGAACCCACCGAAGACCGCGCCAcc                   >  5:366944/1‑147 (MQ=255)                                                                                                                                  cAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATGGCAATCCCGGAACCCACCGAAGACCGCGCCACCCagga              <  7:345843/149‑1 (MQ=255)                                                                                                                                  cAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATGGCAATCCCGGAACCCACCGAAGACCGCGCCACCCagga              <  6:366944/149‑1 (MQ=255)                                                                                                                                      tGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATGGCAATCCCGGAACCCACCGAAGACCGCGCCACCCAGGAGgcc          <  4:90307/149‑1 (MQ=255)                                                                                                                                        aaCGTCAGCGGCGAAGACAGTAAATCCGGCTGCACACCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATGGCAATCCCGGAACCCACCGAAGACCGCGCCACCCAGGAGgccgc        >  7:43324/1‑149 (MQ=255)                                                                                                                                           gTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATGGCAATCCCGGAACCCACCGAAGACCGCGCCACCCAGGAGGCCGCCtt     >  2:95197/1‑149 (MQ=255)                                                                                                                                              agcggcgAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATGGCAATCCCGGAACCCACCGAAGACCGCGCCACCCAGGAGGCCGCCTTCGc  >  2:9156‑M2/8‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                              TTCAGTCGAACAAGACCAAAGCCATCGCCGAGCATTTCGACTGGGTGCATTCCGTGGACCGCCTGAAAATTGC‑CCAACGCCTGTCGGAACAGCGCCCTGCGGGGCTGGCGCCGCTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGTAAATCCGGCTGCACCCCAGCCGACCTACCCGCGTTGGCCAAAGCCGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATGGCAATCCCGGAACCCACCGAAGACCGCGCCACCCAGGAGGCCGCCTTCGC  >  NC_002947/5818251‑5818539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.