| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5882284 = | 58 (0.990) | 3 (0.050) | 3/248 | NT | 5.4% | coding (845/1230 nt) | serA | bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase |
| ? | NC_002947 | 5882314 = | 49 (0.870) | coding (875/1230 nt) | serA | bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase | |||||
TTCCGGGAAGTTGACCGAGGACACCGAGGTACCGTTGTCGCTGTACTTGACCAGTTTCTCGGCCACTTCCAGGCCGATGTTGGCCTGGGCTTCGGCGGTGGAACCACCAATGTGCGGCGTCAGGATCACGTTGTCGAGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5882426‑5882284‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcACATTGGTGGTTCCACCGCCGAAGCCCAGGCCAACATCGGCCTGGAAGTGGCCGAGAAACTGGTCAAGTACAGCGACAACGGTACCTCGGTGTCCTCGGTCAACTTCCCGGAAGTGGCCCTGCCAGCGCACCCAGGCAAACACCGTC > NC_002947/5882314‑5882460 TTCCGGGAAGTTGACCGAGGACACCGAGGTACCGTTGTCGCTGTACTTGACCAGTTTCTCGGCCACTTCCAGGCCGATGTTGGCCTGGGCTTCGGCGGTGGAACCACCAATGTGCGGCGTCAGGATCACGTTGTCGAGGCCG < 1:114460/142‑1TTCCGGGAAGTTGACCGAGGACACCGAGGTACCGTTGTCGCTGTACTTGACCAGTTTCTCGGCCACTTCCAGGCCGATGTTGGCCTGGGCTTCGGCGGTGGAACCACCAATGTGCGGCGTCAGGATCACGTTGTCGAGGCCG > 2:114460/1‑142 CCAATGTGCGGCGTCAGGATCACGTTGTCGAGGCCGCACATTGGTGGTTCCACCGCCGAAGCCCAGGCCAACATCGGCCTGGAAGTGGCCGAGAAACTGGTCAAGTACAGCGACAACGGTACCTCGGTGTCCTCGGTCAACTTCCCGG > 4:357803/1‑148 GTGCGGCGTCAGGATCACGTTGTCGAGGCCGCACATTGGTGGTTCCACCGCCGAAGCCCAGGCCAACATCGGCCTGGAAGTGGCCGAGAAACTGGTCAAGTACAGCGACAACGGTACCTCGGTGTCCTCGG > 5:202050/1‑131 GTGCGGCGTCAGGATCACGTTGTCGAGGCCGCACATTGGTGGTTCCACCGCCGAAGCCCAGGCCAACATCGGCCTGGAAGTGGCCGAGAAACTGGTCAAGTACAGCGACAACGGTACCTCGGTGTCCTCGG < 6:202050/131‑1 GCCGCACATTGGTGGTTCCACCGCCGAAGCCCAGGCCAACATCGGCCTGGAAGTGGCCGAGAAACTGGTCAAGTACAGCGACAACGGTACCTCGGTGTCCTCGGTCAACTTCCCGGAAGTGGCCCTGCCAGCGCACCCAGGCAAACACC < 3:357803/149‑1 CGCACATTGGTGGTTCCACCGCCGAAGCCCAGGCCAACATCGGCCTGGAAGTGGCCGAGAAACTGGTCAAGTACAGCGACAACGGTACCTCGGTGTCCTCGGTCAACTTCCCGGAAGTGGCCCTGCCAGCGCA < 3:212820/133‑1 CGCACATTGGTGGTTCCACCGCCGAAGCCCAGGCCAACATCGGCCTGGAAGTGGCCGAGAAACTGGTCAAGTACAGCGACAACGGTACCTCGGTGTCCTCGGTCAACTTCCCGGAAGTGGCCCTGCCAGCGCA > 4:212820/1‑133 GCACATTGGTGGTTCCACCGCCGAAGCCCAGGCCAACATCGGCCTGGAAGTGGCCGAGAAACTGGTCAAGTACAGCGACAACGGTACCTCGGTGTCCTCGGTCAACTTCCCGGAAGTGGCCCTGCCAGCGCACCCAGGCAAACACCGTC > 7:91928/1‑149 TTCCGGGAAGTTGACCGAGGACACCGAGGTACCGTTGTCGCTGTACTTGACCAGTTTCTCGGCCACTTCCAGGCCGATGTTGGCCTGGGCTTCGGCGGTGGAACCACCAATGTGCGGCGTCAGGATCACGTTGTCGAGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5882426‑5882284‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcACATTGGTGGTTCCACCGCCGAAGCCCAGGCCAACATCGGCCTGGAAGTGGCCGAGAAACTGGTCAAGTACAGCGACAACGGTACCTCGGTGTCCTCGGTCAACTTCCCGGAAGTGGCCCTGCCAGCGCACCCAGGCAAACACCGTC > NC_002947/5882314‑5882460 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |