New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5917105 =	60 (1.020)	7 (0.120)	6/246	NT	12.5%	coding (163/1368 nt)	ygiF	thiamine triphosphatase
	?	NC_002947	5917135 =	41 (0.730)					coding (193/1368 nt)	ygiF	thiamine triphosphatase

AGCAGGTGGCGTCCAGCTTCTTCAGGTCGAGCTTGACCTTGTCCAGGTTCCATTCGTACTCGTTGCGTTCGGACAGGCCGGCCACGCTCTGGCCGCGGCACTTGAGGGTTTGAATGACAGCGTCGCCATCGCGGCGCAGGCGCAGGGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5917255‑5917105 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgacGCTGTCATTCAAACCCTCAAGTGCCGCGGCCAGAGCGTGGCCGGCCTGTCCGAACGCAACGAGTACGAATGGAACCTGGACAAGGTCAAGCTCGACCTGAAGAAGCTGGACGCCACCTGCTGGCCCGAGCAACTGGCCAACCTGGAC  >  NC_002947/5917135‑5917281                                                                                                                                                                                                                                                                                                            AGCAGGTGGCGTCCAGCTTCTTCAGGTCGAGCTTGACCTTGTCCAGGTTCCATTCGTACTCGTTGCGTTCGGACAGGCCGGCCACGCTCTGGCCGCGGCACTTGAGGGTTTGAATGACAGCGTCGCCATCGCGGCGCAGGCGCAGGGC                                                                                                                                                        >  2:241357/1‑148                                                                                                                 AATGACAGCGTCGCCATCGCGGCGCAGGCGCAGGGCGACGCTGTCATTCAAACCCTCAAGTGCCGCGGCCAGAGC                                                                                                                 <  5:253154/75‑1                                                                                                                 AATGACAGCGTCGCCATCGCGGCGCAGGCGCAGGGCGACGCTGTCATTCAAACCCTCAAGTGCCGCGGCCAGAGC                                                                                                                 >  6:253154/1‑75                                                                                                                       AGCGTCGCCATCGCGGCGCAGGCGCAGGGCGACGCTGTCATTCAAACCCTCAAGTGCCGCGGCCAGAGCGTGGCCGGCCTGTCCGAACGCAACGAGTACGAATGGAACCTGGACAAGGTCA                                                             <  7:259457/121‑1                                                                                                                       AGCGTCGCCATCGCGGCGCAGGCGCAGGGCGACGCTGTCATTCAAACCCTCAAGTGCCGCGGCCAGAGCGTGGCCGGCCTGTCCGAACGCAACGAGTACGAATGGAACCTGGACAAGGTCA                                                             >  8:259457/1‑121                                                                                                                       AGCGTCGCCATCGCGGCGCAGGCGCAGGGCGACGCTGTCATTCAAACCCTCAAGTGCCGCGGCCAGAGCGTGGCCGGCATGTCCTAACGCAACGAGTACGAATGGAACCTGGACAAGGTCAAGCTCGACCTGAAGAAGCTCGACGCCAC                                 >  6:324299/1‑149                                                                                                                             GCCATCGCGGCGCAGGCGCAGGGCGACGCTGTCATTCAAACCCTCAAGTGCCGCGGCCAGAGCGTGGCCGGCCTGTCCGAACGCAACGAGTACGAATGGAACCTGGACAAGGTCAAGCTCGACCTGAAGAAGCTGGACGCCACCTGCTG                           >  7:63866/1‑149                                                                                                                                   GCGGCGCAGGCGCAGGGCGACGCTGTCATTCAAACCCTCAAGTGCCGCGGCCAGAGCGTGGCCGGCCTGTCCGAACGCAACGAGTACGAATGGAACCTGGACAAGGTCAAGCTCGACCTGAAGAAGCTGGACGCCACCTGCTGGCCCGA                     <  8:63866/149‑1                                                                                                                                                      ACGCTGTCATTCAAACCCTCAAGTGCCGCGGCCAGAGCGTGGCCGGCCTGTCCGAACGCAACGAGTACGAATGGAACCTGGACAAGGTCAAGCTCGACCTGAAGAAGCTGGACGCCACCTGCTGGCCCGAGCAACTGGCCAACCTGGAC  <  3:298446/149‑1                                                                                                                                                                                                                                                                                                            AGCAGGTGGCGTCCAGCTTCTTCAGGTCGAGCTTGACCTTGTCCAGGTTCCATTCGTACTCGTTGCGTTCGGACAGGCCGGCCACGCTCTGGCCGCGGCACTTGAGGGTTTGAATGACAGCGTCGCCATCGCGGCGCAGGCGCAGGGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5917255‑5917105 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgacGCTGTCATTCAAACCCTCAAGTGCCGCGGCCAGAGCGTGGCCGGCCTGTCCGAACGCAACGAGTACGAATGGAACCTGGACAAGGTCAAGCTCGACCTGAAGAAGCTGGACGCCACCTGCTGGCCCGAGCAACTGGCCAACCTGGAC  >  NC_002947/5917135‑5917281

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.