| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6021465 = | 51 (0.870) | 3 (0.050) | 3/246 | NT | 5.6% | coding (185/354 nt) | PP_5272 | hypothetical protein |
| ? | NC_002947 | 6021517 = | 53 (0.940) | coding (133/354 nt) | PP_5272 | hypothetical protein | |||||
TCATCCCCTCTTTCGAGTGCGAGCCCGGCTGCCACGACTGCTGCGGCCCGGTCACTACCTCGGCGGAGGAAATGGCCCGCCTGCCGCGCAAGTCCCAGGCCGAGCAGGACGCTGCTCTGGAGCGTCTGGACTGCGTGCACCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6021609‑6021465‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgggACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTGGCAGCCGGGCTCGCACTCGAAAGAGGGGATGAGTTCGCGCAGGAAGTGGATCTTGTGGCGGTTGCAGGACATGACGGGATACAAGC > NC_002947/6021517‑6021663 TCATCCCCTCTTTCGAGTGCGAGCCCGGCTGCCACGACTGCTGCGGCCCGGTCACTACCTCGGCGGAGGAAATGGCCCGCCTGCCGCGCAAGTCCCAGGCCGAGCAGGACGCTGCTCTGGAGCGTCTGGACTGCGTGCACCTGG > 7:321209/1‑144TCATCCCCTCTTTCGAGTGCGAGCCCGGCTGCCACGACTGCTGCGGCCCGGTCACTACCTCGGCGGAGGAAATGGCCCGCCTGCCGCGCAAGTCCCAGGCCGAGCAGGACGCTGCTCTGGAGCGTCTGGACTGCGTGCACCTGG < 8:321209/144‑1 AAGTCCCAGGCCGAGCAGGACGCTGCTCTGGAGCGTCTGGACTGCGTGCACCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTGGCAGCCGGGCTCGCACTCGAAAGAGGGGAT > 7:17185/1‑147 CCCAGGCCGAGCAGGACGCTGCTCTGGAGCGTCTGGACTGCGTGCACCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTGGCAGCCGGGCTCGCACTCGAAAGAGGGGATGAGTTC > 4:5448/1‑149 CCAGGCCGAGCAGGACGCTGCTCTGGAGCGTCTGGACTGCGTGCACCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTGGCAGCCGGGCTCGCACTCGAAAGAGGGGATGAGTTC < 8:17185/148‑1 CTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTGGCAGCCGGGCTCGCACTCGAAAGAGGGGATGAGTTCGCGCAGGAAGTGGATCTTGTGGCGGTTGCAGGACATGACGGGATAC > 2:45869/1‑148 TGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTGGCAGCCGGGCTCGCACTCGAAAGAGGGGATGAGTTCGCGCAGGAAGTGGATCTTGTGGCGGTTGCAGGACATGACGGGATAC > 2:372361/1‑147 TGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTGGCAGCCGGGCTCGCACTCGAAAGAGGGGATGAGTTCGCGCAGGAAGTGGATCTTGTGGCGGTTGCAGGACATGACGGGATAC > 3:229029/1‑147 TGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTGGCAGCCGGGCTCGCACTCGAAAGAGGGGATGAGTTCGCGCAGGAAGTGGATCTTGTGGCGGTTGCAGGACATGACGGG < 5:321233/143‑1 TGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTGGCAGCCGGGCTCGCACTCGAAAGAGGGGATGAGTTCGCGCAGGAAGTGGATCTTGTGGCGGTTGCAGGACATGACGGG > 6:321233/1‑143 GGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGGGACCGGGCCGCAGCAGTCGTGGCAGCCGGGCTCGCACTCGAAAGAGGGGATGAGTTCGCGCAGGAAGTGGATCTTGTGGCGGTTGCAGGACATGACGGGATACAAGC < 6:287089/149‑1 TCATCCCCTCTTTCGAGTGCGAGCCCGGCTGCCACGACTGCTGCGGCCCGGTCACTACCTCGGCGGAGGAAATGGCCCGCCTGCCGCGCAAGTCCCAGGCCGAGCAGGACGCTGCTCTGGAGCGTCTGGACTGCGTGCACCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6021609‑6021465‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgggACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTGGCAGCCGGGCTCGCACTCGAAAGAGGGGATGAGTTCGCGCAGGAAGTGGATCTTGTGGCGGTTGCAGGACATGACGGGATACAAGC > NC_002947/6021517‑6021663 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |