| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6021465 = | 51 (0.870) | 3 (0.050) | 3/246 | NT | 5.6% | coding (185/354 nt) | PP_5272 | hypothetical protein |
| ? | NC_002947 | 6021517 = | 53 (0.940) | coding (133/354 nt) | PP_5272 | hypothetical protein | |||||
GTGGCAATGAACTGGTGGACCAACTGTTCAGCGGCGGGGTCGATCATCGGTTCAGGGCCACGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTGGCAGCCGGGCTCGCACTCGAAAGAGGGGAT > NC_002947/6021318‑6021607 | gcttgtatcccgtcatgtcctgcaaccgccacaagatccacttcctgcgcgaactcatcccctctttcgagtgcgagcccggctgccacgactgctgcggcccggtccctacctcggcggaggaaatggcccgcctgccgcgcaagtcc < 6:287089‑M1/2‑1 (MQ=255) gCAATGAACTGGTGGACCAACTGTTCAGCGGCGGGGTCGATCATCGGTTCAGGGCCACGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAg < 5:295389/149‑1 (MQ=255) gtatcccgtcatgtcctgcaaccgccacaagatccacttcctgcgcgaactcatcccctctttcgagtgcgagcccggctgccacgactgctgcggcccggtcactacctcggcggaggaaatggcccgcctgccgcgcaagtCCCa > 3:229029‑M1/144‑147 (MQ=255) gtatcccgtcatgtcctgcaaccgccacaagatccacttcctgcgcgaactcatcccctctttcgagtgcgagcccggctgccacgactgctgcggcccggtcactacctcggcggaggaaatggcccgcctgccgcgcaagtCCCa > 2:372361‑M1/144‑147 (MQ=255) gtatcccgtcatgtcctgcaaccgccacaagatccacttcctgcgcgaactcatcccctctttcgagtgcgagcccggctgccacgactgctgcggcccggtcactacctcggcggaggaaatggcccgcctgccgcgcaagtCCCAg > 2:45869‑M1/144‑148 (MQ=255) cAATGAACTGGTGGACCAACTGTTCAGCGGCGGGGTCGATCATCGGTTCAGGGCCACGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAgg > 6:327626/1‑149 (MQ=255) cccgtcatgtcctgcaaccgccacaagatccacttcctgcgcgaactcatcccctctttcgagtgcgagcccggctgccacgactgctgcggcccggtcactacctcggcggaggaaatggcccgcctgccgcgcaagtCCCa > 6:321233‑M1/140‑143 (MQ=255) cccgtcatgtcctgcaaccgccacaagatccacttcctgcgcgaactcatcccctctttcgagtgcgagcccggctgccacgactgctgcggcccggtcactacctcggcggaggaaatggcccgcctgccgcgcaagtCCCa < 5:321233‑M1/4‑1 (MQ=255) aaCTGGTGGACCAACTGTTCAGCGGCGGGGTCGATCATCGGTTCAGGGCCACGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCAc < 4:339886/149‑1 (MQ=255) tggACCAACTGTTCAGCGGCGGGGTCGATCATCGGTTCAGGGCCACGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTc < 1:140679/149‑1 (MQ=255) gACCAACTGTTCAGCGGCGGGGTCGATCATCGGTTCAGGGCCACGACCACGCTGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATGATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCa < 1:345990/149‑1 (MQ=255) gACCAACTGTTCAGCGGCGGGGTCGATCATCGGTTCAGGGCCACGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTTCAGCCGTTGGGGCCCAGGTGCACGCAGTcc < 8:254394/148‑1 (MQ=255) gACCAACTGTTCAGCGGCGGGGTCGATCATCGGTTCAGGGCCACGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCa < 8:216597/149‑1 (MQ=255) gACCAACTGTTCAGCGGCGGGGTCGATCATCGGTTCAGGGCCACGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCa < 3:178033/149‑1 (MQ=255) aaCTGTTCAGCGGCGGGGTCGATCATCGGTTCAGGGCCACGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACg > 4:102923/1‑149 (MQ=255) aCTGTTCAGCGGCGGGGTCGATCATCGGTTCAGGGCCACGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGc > 3:208747/1‑149 (MQ=255) ttCAGCGGCGGGGTCGATCATCGGTTCAGGGCCACGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTcc < 4:208747/148‑1 (MQ=255) aGCGGCGGGGTCGATCATCGGTTCAGGGCCACGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCaga < 2:31369/148‑1 (MQ=255) cggcggGGTCGATCATCGGTTCAGGGCCACGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGagca < 2:231301/149‑1 (MQ=255) cggGGTCGATCATCGGTTCAGGGCCACGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCg < 1:105872/149‑1 (MQ=255) ggTCGATCATCGGTTCAGGGCCACGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGCGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTcc > 5:322445/1‑149 (MQ=255) gTCGATCATCGGTTCAGGGCCACGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCt > 3:77460/1‑149 (MQ=255) gATCATCGGTTCAGGGCCACGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCt > 2:297316/1‑149 (MQ=255) gaactcatcccctctttcgagtgcgagcccggctgccacgactgctgcggcccggtcactacctcggcggaggaaatggcccgcctgccgcgcaagtCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTggg > 4:5448‑M1/98‑149 (MQ=255) gaactcatcccctctttcgagtgcgagcccggctgccacgactgctgcggcccggtcactacctcggcggaggaaatggcccgcctgccgcgcaagtCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTgg < 8:17185‑M1/51‑1 (MQ=255) gggCCACGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTc > 4:250460/1‑131 (MQ=255) gggCCACGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTc < 3:250460/131‑1 (MQ=255) atcccctctttcgagtgcgagcccggctgccacgactgctgcggcccggtcactacctcggcggaggaaatggcccgcctgccgcgcaagtCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACtt > 7:17185‑M1/92‑147 (MQ=255) cACGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTgcgc > 1:77729/1‑149 (MQ=255) aCGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGcgcg > 7:97200/1‑149 (MQ=255) aCGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGcgcg < 1:68379/149‑1 (MQ=255) aCGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGc > 7:274715/1‑149 (MQ=255) gCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTtc > 5:287089/1‑149 (MQ=255) gggTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAg < 3:162314/149‑1 (MQ=255) cGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGAcc < 1:297316/149‑1 (MQ=255) gAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGAc > 6:49265/1‑147 (MQ=255) gAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGAc < 5:49265/147‑1 (MQ=255) gAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCg > 7:274822/1‑149 (MQ=255) acaacCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCggg < 5:327626/149‑1 (MQ=255) ccGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCggg > 5:351622/1‑116 (MQ=255) ccGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCggg < 6:351622/116‑1 (MQ=255) gCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCCTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTTCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCgcag > 4:86440/1‑148 (MQ=255) cAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCGGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCgcagca < 8:97200/149‑1 (MQ=255) cAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCgcagca < 4:77460/149‑1 (MQ=255) aGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGcagcag > 5:44731/1‑149 (MQ=255) cGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCg > 8:345856/1‑136 (MQ=255) cGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCg < 7:345856/136‑1 (MQ=255) cGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTGGCAGcc < 6:322445/149‑1 (MQ=255) ttCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTGGCAGCCGGGCt > 6:179847/1‑149 (MQ=255) cATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTGGCAGCCGGGc < 6:44731/146‑1 (MQ=255) tACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTGGCAGCCGGGCTCGCa > 5:121722/1‑149 (MQ=255) cacCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTgg < 6:47677/133‑1 (MQ=255) cacCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTgg > 5:47677/1‑133 (MQ=255) cacCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTGGCAGCCGGGCTCGCACt > 2:151588/1‑149 (MQ=255) cGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTACTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTGGCAGCCGGGCTCGCACTCg > 3:142537/1‑148 (MQ=255) aGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTTCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTGGCAGCCGGGCTCGCACTCGAAagag < 3:86440/149‑1 (MQ=255) aGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTg > 5:289189/1‑124 (MQ=255) aGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTg < 6:289189/124‑1 (MQ=255) gCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTGGCAGCCGGGCTCGCACTCGAAAGAgg < 7:257947/149‑1 (MQ=255) gCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTGGCAGCCGGGCTCGCACTCGAAAGAgg > 6:164614/1‑149 (MQ=255) ttGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCTCAGCAGTCGTGGCAGCCGGGCTCGCACTCGAAAGAGGGGAt < 2:77729/149‑1 (MQ=255) | GTGGCAATGAACTGGTGGACCAACTGTTCAGCGGCGGGGTCGATCATCGGTTCAGGGCCACGACCACGCGGGCAGGCCATGCGCGGGGTGGTACCGAACAACCGGCAGATCATCGGCCGCTCTTCATACACCGTGCAGCCGTTGGGGCCCAGGTGCACGCAGTCCAGACGCTCCAGAGCAGCGTCCTGCTCGGCCTGGGACTTGCGCGGCAGGCGGGCCATTTCCTCCGCCGAGGTAGTGACCGGGCCGCAGCAGTCGTGGCAGCCGGGCTCGCACTCGAAAGAGGGGAT > NC_002947/6021318‑6021607 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |