| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6071622 = | 60 (1.020) | 3 (0.050) | 3/246 | NT | 5.5% | intergenic (‑45/+57) | phoU/pstB‑II | phosphate transport‑associated protein/phosphate ABC transporter ATP‑binding protein |
| ? | NC_002947 | 6071671 = | 46 (0.820) | intergenic (‑94/+8) | phoU/pstB‑II | phosphate transport‑associated protein/phosphate ABC transporter ATP‑binding protein | |||||
GGGCAAACTGGTCGAATTCGGGGATACCGATACCCTGTTCACCAACCCGGCGAAGAAGCAGACCGAAGACTACATCACCGGTCGCTACGGCTAAGCGCCGCTCGCGAAACAGGCACCTTGGTGTCTGGCACCGGGGTTGCCGGTGTTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6071772‑6071622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCT‑GCTTCTTCGCCGGGTTGGTGAACAGGGTATCGGTATCCCCGAATTCGACCAGTTTGCCCATGTACATGAACGCGGTGTAATCCGAAACACGCGCCGCTTGCTG > NC_002947/6071671‑6071816 GGGCAAACTGGTCGAATTCGGGGATACCGATACCCTGTTCACCAACCCGGCGAAGAAGCAGACCGAAGACTACATCACCGGTCGCTACGGCTAAGCGCCGCTCGCGAAACAGGCACCTTGGTGTCTGGCACCGGGGTTGCCGGTGTTCG > 1:158694/1‑149 GCAAACTGGTCGAATTCGGGGATACCGATACCCTGTTCACCAACCCGGCGAAGAAGCAGACCGAAGACTACATCACCGGTCGCTACGGCTAAGCGCCGCTCGCGAAACAGGCACCTTGGTGTCTGGCACCGGGGTTGCCGGTGTTCGCG > 4:200354/1‑149 CTCGCGAAACAGGCACCTTGGTGTCTGGCACCGGGGTTGCCGGTGTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTAGCTTCTTCGCCGGGTTGGTGAACAGGGTATCGGT < 1:49850/129‑1 CTCGCGAAACAGGCACCTTGGTGTCTGGCACCGGGGTTGCCGGTGTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCT‑GCTTCTTCGCCGGGTTGGTGAACAGGGTATCGGT > 2:49850/1‑128 GCGAAACAGGCACCTTGGTGTCTGGCACGGGGGTTGCCGGTGTTCGAGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCT‑GCTTCTTCGCCGGGTTGGTGAACAGGGTATCGGTATCCCCGAATTCGACCAGTTTGCC > 1:211424/1‑149 GCGAGTGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCT‑GCTTCTTCGCCGGGTTGGTGAACAGGGTATCGGTATCCCCGAATTCGACCAGTTTGCCCATGTACATGAACGCGGTGTAATCCGAAACACGCGCCGCTTGCTG > 2:241006/1‑149 GGGCAAACTGGTCGAATTCGGGGATACCGATACCCTGTTCACCAACCCGGCGAAGAAGCAGACCGAAGACTACATCACCGGTCGCTACGGCTAAGCGCCGCTCGCGAAACAGGCACCTTGGTGTCTGGCACCGGGGTTGCCGGTGTTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6071772‑6071622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCT‑GCTTCTTCGCCGGGTTGGTGAACAGGGTATCGGTATCCCCGAATTCGACCAGTTTGCCCATGTACATGAACGCGGTGTAATCCGAAACACGCGCCGCTTGCTG > NC_002947/6071671‑6071816 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |