New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1034742 =	40 (0.680)	3 (0.050)	3/248	NT	6.8%	coding (779/1158 nt)	PP_0892	phospholipase family protein
	?	NC_002947	1034782 =	44 (0.780)					coding (819/1158 nt)	PP_0892	phospholipase family protein

AGGACATCCTGCACGCGCTGGTACGGGCGCTGAACAGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGCTGTGGTAGACGACTGGGTCAGCG  >  NC_002947/1034595‑1034885                                                                                                                                                     |                                                                                                                                                aGGACATCCTGCACGCGCTGGTACGGGCGCTGAACAGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGAcc                                                                                                                                                >  2:257968/1‑149 (MQ=255)  ggACATCCTGCACGCGCTGGTACGGGCGCTGAACAGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTCGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCg                                                                                                                                               >  8:352351/1‑149 (MQ=255)    aCATCCTGCACGCGCTGGTACGGGCGCTGAACTGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGc                                                                                                                                             >  1:232682/1‑149 (MQ=255)       gaagcgcaagttccagtggtcgaagttgcacgaaccgacgctgacccagtcgtctaccacagccatcttcaggtgcaggaagcacggctggtactcgaaaatccgtacgcccgcgcgcaacagacgcgggtagtaacgatgcccggccc                                                                                                                                           <  5:305252‑M1/7‑1 (MQ=255)         cTGCACGCGCTGGTACGGGCGCTGAACAGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCcgcg                                                                                                                                        >  4:367589/1‑149 (MQ=255)           gCACGCGCTGGTACGGGCGCTGAACAGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTa                                                                                                                                      >  4:138952/1‑149 (MQ=255)            cACGCGCTGGTACGGGCGCTGAACAGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTa                                                                                                                                      <  2:289492/148‑1 (MQ=255)               gcgcTGGTACGGGCGCTGAACAGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGa                                                                                                                                  >  2:238095/1‑149 (MQ=255)                         gggCGCTGAACAGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCg                                                                                                                        >  4:369878/1‑149 (MQ=255)                                 aaCAGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGtacgcta                                                                                                                <  1:21599/149‑1 (MQ=255)                                  aCAGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGAcc                                                                                                                                                <  8:88888/116‑1 (MQ=255)                                  aCAGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGAcc                                                                                                                                                >  7:88888/1‑116 (MQ=255)                                  aCAGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGtacgctac                                                                                                               >  4:271941/1‑149 (MQ=255)                                    aGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGtacgc                                                                                                                  <  7:67863/144‑1 (MQ=255)                                    aGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGtacgc                                                                                                                  >  8:67863/1‑144 (MQ=255)                                      cGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCg                                                                                                           <  6:147519/149‑1 (MQ=255)                                        accgacgctgacccagtcgtctaccacagccatcttcaggtgcaggaagcacggctggtactcgaaaatccgtacgcccgcgcgcaacagacgcgggtagtaacgatgcCCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCgg                                                                                                          >  6:305252‑M1/110‑149 (MQ=255)                                                cGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTta                                                                                                 <  8:210617/149‑1 (MQ=255)                                                 gggTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCg                                                                                                    >  1:243904/1‑145 (MQ=255)                                                 gggTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCg                                                                                                    <  2:243904/145‑1 (MQ=255)                                                        gctggcCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCcgc                                                                                         >  6:42795/1‑149 (MQ=255)                                                               aCGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGtt                                                                                  <  3:271941/149‑1 (MQ=255)                                                                cacagccatcttcaggtgcaggaagcacggctggtactcgaaaatccgtacgcccgcgcgcaacagacgcgggtagtaacgatgcCCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGtt                                                                                                  <  3:156750‑M1/48‑1 (MQ=255)                                                                cacagccatcttcaggtgcaggaagcacggctggtactcgaaaatccgtacgcccgcgcgcaacagacgcgggtagtaacgatgcCCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGtt                                                                                                  >  4:156750‑M1/86‑133 (MQ=255)                                                                             gCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCg                                                                       <  1:257968/146‑1 (MQ=255)                                                                                gACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTta                                                                                                 <  3:93393/117‑1 (MQ=255)                                                                                gACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTta                                                                                                 >  4:93393/1‑117 (MQ=255)                                                                                   cTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGAttt                                                              >  7:139556/1‑149 (MQ=255)                                                                                       aGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGa                                                          <  3:369878/149‑1 (MQ=255)                                                                                          gTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTa                                                       <  3:138952/149‑1 (MQ=255)                                                                                              gcCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTc                                                            <  4:141459/140‑1 (MQ=255)                                                                                              gcCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTc                                                            >  3:141459/1‑140 (MQ=255)                                                                                                cGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGc                                                                                                        <  7:280681/94‑1 (MQ=255)                                                                                                cGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGc                                                                                                        >  8:280681/1‑94 (MQ=255)                                                                                                     gTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGtacgc                                                                                                                  <  5:267679/79‑1 (MQ=255)                                                                                                     gTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGtacgc                                                                                                                  >  6:267679/1‑79 (MQ=255)                                                                                                     gTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCt                                            >  4:348775/1‑149 (MQ=255)                                                                                                        gcgcCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTc                                          <  5:42795/148‑1 (MQ=255)                                                                                                          gcCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTc                                          <  4:322398/146‑1 (MQ=255)                                                                                                          gcCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTc                                          >  3:322398/1‑146 (MQ=255)                                                                                                          gcCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTg                                       <  8:319334/149‑1 (MQ=255)                                                                                                                 tGCCAGCAAGGGCCTGGACGTGCGTCTGTGTGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTa                                                                     >  1:216324/1‑113 (MQ=255)                                                                                                                 tGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTa                                                                     <  2:216324/112‑1 (MQ=255)                                                                                                                     aGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGAt                            <  2:232682/149‑1 (MQ=255)                                                                                                                      gCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATg                           >  8:201853/1‑149 (MQ=255)                                                                                                                        aaGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGc                         >  5:197767/1‑149 (MQ=255)                                                                                                                            gCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGCtgtg                     <  1:238095/149‑1 (MQ=255)                                                                                                                              cTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCAGCCGTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCTCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGCTGTgg                    <  6:18822/148‑1 (MQ=255)                                                                                                                              cTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACACCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGCTGTgg                    >  5:18822/1‑148 (MQ=255)                                                                                                                                                gttgACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGCTGTGGTAGACGACTGGGTCAGCg  >  1:354133/1‑149 (MQ=255)                                                                                                                                                    aCCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGCTGTGGTAgac               <  4:361842/132‑1 (MQ=255)                                                                                                                                                    aCCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGCTGTGGTAgac               >  3:361842/1‑132 (MQ=255)                                                                                                                                                     |                                                                                                                                                AGGACATCCTGCACGCGCTGGTACGGGCGCTGAACAGCGGCCAGAAACGGGTGTGGCTGGCCACGCCGTACTTCTTGCCGACCTGGAGCGTGCGCCGGTCGTTGCGCCGGGCTGCCAGCAAGGGCCTGGACGTGCGTCTGT‑TGTTGACCGGCCCGCGTACCGATCACCCCTCGGTACGCTACGCCGGGCATCGTTACTACCCGCGTCTGTTGCGCGCGGGCGTACGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGCTGTGGTAGACGACTGGGTCAGCG  >  NC_002947/1034595‑1034885

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.