New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1102881 =73 (1.240)7 (0.130) 5/242 NT 9.1% intergenic (+20/‑98) ttg2E/ttg2F toluene‑tolerance protein/BolA family protein
?NC_002947 1102927 = 71 (1.290)intergenic (+66/‑52) ttg2E/ttg2F toluene‑tolerance protein/BolA family protein

CTGTCGCTACTGCTGGCGTACATGCGGGATGCTCAGGCCACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCTTGAAGAGAAATTGCCGGGTTCC  >  NC_002947/1102733‑1103029
                                                                                                                                                    |                                                                                                                                                    
cacgttcaactggaagttgcagccttcgccttcaacttcgacccgggaacccggcaatttctcttcaaggaagcttttaacttctacggcctgcatgctcaacctcaatcggcgcccgatgcgcacgggtcggccatcatacaaaaaag                                                                                                                                                      <  6:1266‑M1/1‑1 (MQ=255)
   gttcaactggaagttgcagccttcgccttcaacttcgacccgggaacccggcaatttctcttcaaggaagcttttaacttctacggcctgcatgctcaacctcaatcggcgcccgatgcgcacgggtcggccatcatacaaaaaaGccc                                                                                                                                                   <  1:348315‑M1/4‑1 (MQ=255)
    ttcaactggaagttgcagccttcgccttcaacttcgacccgggaacccggcaatttctcttcaaggaagcttttaacttctacggcctgcatgctcaacctcaatcggcgcccgatgcgcacgggtcggccatcatacaaaaaaGcccc                                                                                                                                                  <  4:300606‑M1/5‑1 (MQ=255)
    ttcaactggaagttgcagccttcgccttcaacttcgacccgggaacccggcaatttctcttcaaggaagcttttaacttctacggcctgcatgctcaacctcaatcggcgcccgatgcgcacgggtcggccatcatacaaaaaaGcccc                                                                                                                                                  >  3:272466‑M1/145‑149 (MQ=255)
     gCTACTGCTGGCGTACATGCGGGATGCTCAGGCCACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCt                                                                                                                                                 <  5:334367/149‑1 (MQ=255)
       tACTGCTGGCGTACATGCGGGATGCTCAGGCCACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCg                                                                                                                                               >  2:198297/1‑149 (MQ=255)
                 gTACATGCGGGATGCTCAGGCCACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAg                                                                                                                                     >  2:280704/1‑149 (MQ=255)
                         gggATGCTCAGGCCACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGtt                                                                                                                             <  1:369683/149‑1 (MQ=255)
                          ggATGCTCAGGCCACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTg                                                                                                                            <  6:321316/149‑1 (MQ=255)
                           gATGCTCAGGCCACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATgg                                                                                                                                                      <  6:82973/122‑1 (MQ=255)
                           gATGCTCAGGCCACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATgg                                                                                                                                                      >  5:82973/1‑122 (MQ=255)
                           gATGCTCAGGCCACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTgg                                                                                                                           >  5:79413/1‑149 (MQ=255)
                           gATGCTCAGGAAACTGGCAAGGCGTGATAGGTGCGTGGAATGCCTTATTATATGCGGGAAATTGCAGATGTATATGATCTCGATGAAGTTCTGGCAAGCTAGTGGACATTAACGGATGATGGCCCCTCGGTCAGAGAAGACTTCGTTgg                                                                                                                           >  4:359739/1‑149 (MQ=255)
                            ccttcaacttcgacccgggaacccggcaatttctcttcaaggaagcttttaacttctacggcctgcatgctcaacctcaatcggcgcccgatgcgcacgggtcggccatcatacaaaaaaGccc                                                                                                                                                   <  1:199201‑M1/4‑1 (MQ=255)
                            ccttcaacttcgacccgggaacccggcaatttctcttcaaggaagcttttaacttctacggcctgcatgctcaacctcaatcggcgcccgatgcgcacgggtcggccatcatacaaaaaaGccc                                                                                                                                                   >  2:199201‑M1/121‑124 (MQ=255)
                                 aacttcgacccgggaacccggcaatttctcttcaaggaagcttttaacttctacggcctgcatgctcaacctcaatcggcgcccgatgcgcacgggtcggccatcatacaaaaaaGCCCCTCGCCAGCGAAGCCTTCGTTGGGCTTCg                                                                                                                     >  2:31602‑M1/116‑148 (MQ=255)
                                    gCCACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTGCGTTGGGCTTCGCAg                                                                                                                  >  6:377293/1‑149 (MQ=255)
                                       aCTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGc                                                                                                                >  5:361260/1‑148 (MQ=255)
                                           gCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAggg                                                                                                           <  1:196894/149‑1 (MQ=255)
                                           gCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAggg                                                                                                           >  4:207520/1‑149 (MQ=255)
                                           gCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAggg                                                                                                           <  6:79413/149‑1 (MQ=255)
                                           cgggaacccggcaatttctcttcaaggaagcttttaacttctacggcctgcatgctcaacctcaatcggcgcccgatgcgcacgggtcggccatcatacaaaaaaGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAggg                                                                                                           >  5:1266‑M1/106‑149 (MQ=255)
                                             gacgCGTGCGAGGTGCCTGGCATGACTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGTCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTACGCAGAAGAGGGGc                                                                                                         >  8:313506/4‑149 (MQ=255)
                                             aaGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGc                                                                                                         >  4:243835/1‑149 (MQ=255)
                                               aacccggcaatttctcttcaaggaagcttttaacttctacggcctgcatgctcaacctcaatcggcgcccgatgcgcacgggtcggccatcatacaaaaaaGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCtt                                                                                                       >  3:300606‑M1/102‑149 (MQ=255)
                                                   tGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGCCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCtttttt                                                                                                   <  1:280704/149‑1 (MQ=255)
                                                     cGAGGTGCGTTGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGt                                                                                                 <  2:237840/149‑1 (MQ=255)
                                                     cGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGt                                                                                                 <  8:162517/149‑1 (MQ=255)
                                                      gAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTa                                                                                                <  3:131051/149‑1 (MQ=255)
                                                       aGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTat                                                                                               <  5:299611/149‑1 (MQ=255)
                                                             gTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGt                                                                                                 <  2:356408/141‑1 (MQ=255)
                                                             gTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGt                                                                                                 >  1:356408/1‑141 (MQ=255)
                                                             gTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGc                                                                                         <  3:207520/149‑1 (MQ=255)
                                                                  aTGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGAcc                                                                                    >  4:249634/1‑149 (MQ=255)
                                                                     ccTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGt                                                                                 >  6:168780/1‑149 (MQ=255)
                                                                      cTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTg                                                                                >  2:93537/1‑149 (MQ=255)
                                                                       tgatgaTATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTgc                                                                               >  2:348315/1‑149 (MQ=255)
                                                                        gatgatATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCtttt                                                                                                     <  8:188613/126‑1 (MQ=255)
                                                                        gatgatATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCtttt                                                                                                     >  7:188613/1‑126 (MQ=255)
                                                                          ttttaacttctacggcctgcatgctcaacctcaatcggcgcccgatgcgcacgggtcggccatcatacaaaaaaGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAggg                                                                                                           <  1:331661‑M1/44‑1 (MQ=255)
                                                                          ttttaacttctacggcctgcatgctcaacctcaatcggcgcccgatgcgcacgggtcggccatcatacaaaaaaGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAggg                                                                                                           >  2:331661‑M1/75‑118 (MQ=255)
                                                                               tGCGGGAAATTTCCGAGGTCTATGATCTCGATGAAGTGCTTGCAAGCTAGTTGCCAGGCACGGATGATGGCCCCGCGGGCAGCGTAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCggg                                                                       <  8:132268/149‑1 (MQ=255)
                                                                               tGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCGCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCggg                                                                       >  3:220144/1‑149 (MQ=255)
                                                                                  gggAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGgcgc                                                                    >  1:138987/1‑149 (MQ=255)
                                                                                  gggAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGgcgc                                                                    >  6:156529/1‑149 (MQ=255)
                                                                                  gggAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGgcgc                                                                    >  4:118449/1‑149 (MQ=255)
                                                                                  gggAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGgcgc                                                                    >  2:366253/1‑149 (MQ=255)
                                                                                  gggAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGgcgc                                                                    >  8:295796/1‑149 (MQ=255)
                                                                                   ggAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGcc                                                                   >  8:52854/1‑149 (MQ=255)
                                                                                       ggcctgcatgctcaacctcaatcggcgcccgatgcgcacgggtcggccatcatacaaaaaaGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAggg                                                                                                           <  7:48627‑M1/44‑1 (MQ=255)
                                                                                       ggcctgcatgctcaacctcaatcggcgcccgatgcgcacgggtcggccatcatacaaaaaaGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAggg                                                                                                           >  8:48627‑M1/62‑105 (MQ=255)
                                                                                       aTTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGAtt                                                               <  4:31414/149‑1 (MQ=255)
                                                                                          gCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGa                                                             <  1:366253/148‑1 (MQ=255)
                                                                                           ccGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAgg                                                           <  7:52854/149‑1 (MQ=255)
                                                                                            cGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGt                                                          >  7:205876/1‑149 (MQ=255)
                                                                                             gAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGtt                                                         <  1:198297/149‑1 (MQ=255)
                                                                                             gAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGtt                                                         >  2:12447/1‑149 (MQ=255)
                                                                                               ggTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGa                                                       <  5:156529/149‑1 (MQ=255)
                                                                                               ggTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGa                                                       <  3:286387/149‑1 (MQ=255)
                                                                                                gTCTATGATCTCTTTGAAGTGGTGGCAAGCTAGTGGCCAGGAACGGATGATGGCCCCTCGGTCAGCGAAGGCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACGCGTGCGCATCGGGCGCCGATTGAGGTTGAg                                                      <  7:313506/149‑1 (MQ=255)
                                                                                                 tCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAg                                                      >  1:20761/1‑148 (MQ=255)
                                                                                                  cTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGTTGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGTTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGa                                                       <  1:123268/146‑1 (MQ=255)
                                                                                                  cTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGTTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGa                                                       >  2:123268/1‑146 (MQ=255)
                                                                                                   tATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCAt                                                   >  5:148026/1‑149 (MQ=255)
                                                                                                   tATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCAt                                                   >  7:116055/1‑149 (MQ=255)
                                                                                                     tGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATg                                                  <  5:168780/148‑1 (MQ=255)
                                                                                                     tGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGc                                                 <  2:138987/149‑1 (MQ=255)
                                                                                                        tctcGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAgg                                              >  8:116174/1‑149 (MQ=255)
                                                                                                            gATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAgg                                              <  8:274468/145‑1 (MQ=255)
                                                                                                            gATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAg                                               <  3:243835/144‑1 (MQ=255)
                                                                                                                 aGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGaa                                      <  7:295796/148‑1 (MQ=255)
                                                                                                                 aGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAg                                     <  1:12447/149‑1 (MQ=255)
                                                                                                                   tGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGtt                                   <  6:361260/149‑1 (MQ=255)
                                                                                                                    gCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTatga                                                                                             >  1:126711/1‑90 (MQ=255)
                                                                                                                    gCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTatga                                                                                             <  2:126711/90‑1 (MQ=255)
                                                                                                                          aaGATAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCt                            >  7:122789/1‑149 (MQ=255)
                                                                                                                            gCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTc                          >  3:88075/1‑149 (MQ=255)
                                                                                                                            gCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTc                          <  3:249634/149‑1 (MQ=255)
                                                                                                                              tAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCt                        >  7:131960/1‑149 (MQ=255)
                                                                                                                                gTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCtt                       <  8:205876/148‑1 (MQ=255)
                                                                                                                                gTGGCCAGGCACGGATGATGGCCCCCCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCtt                       <  4:220144/148‑1 (MQ=255)
                                                                                                                                   gCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCTTGaa                    <  3:118449/148‑1 (MQ=255)
                                                                                                                                    ccAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCg                                                                         >  4:358322/1‑94 (MQ=255)
                                                                                                                                    ccAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCg                                                                         <  3:358322/94‑1 (MQ=255)
                                                                                                                                    ccAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCTTGAaga                  <  5:229880/149‑1 (MQ=255)
                                                                                                                                    ccAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCTTGAaga                  <  7:116174/149‑1 (MQ=255)
                                                                                                                                          aCGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCTTGAAGAGAAAtt            >  7:206885/1‑149 (MQ=255)
                                                                                                                                              atgatgGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCTTGAAGAGAAATTGCCg        >  1:186095/1‑149 (MQ=255)
                                                                                                                                                gatgGCACATCGGTCAGGGAAGCCTTCGTTGTGCTTCGCAGTCTATGGGCTTTTTTGTATGATGGCCTACCCGTGCGCATAGGGCGCCGATTGAGGTTGAGCATGCATGCCTTAGAATTTAAAAGCTTACTTGAAGAGAAATTGCCgg       <  3:359739/148‑1 (MQ=255)
                                                                                                                                                  tgGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTaaaa                               >  4:142220/1‑122 (MQ=255)
                                                                                                                                                  tgGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTaaaa                               <  3:142220/122‑1 (MQ=255)
                                                                                                                                                    GCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCTTGAAGAGAAATTGCCGGGTTcc  <  1:8383‑M1/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CTGTCGCTACTGCTGGCGTACATGCGGGATGCTCAGGCCACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCTTCGTTGGGCTTCGCAGGCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCTTGAAGAGAAATTGCCGGGTTCC  >  NC_002947/1102733‑1103029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.