New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 1426326NA (NA)5 (0.090) 3/250 NT 100% coding (224/1422 nt) PP_1250 group II intron‑encoding maturase
?NC_002947 = 1426369 0 (0.000)coding (267/1422 nt) PP_1250 group II intron‑encoding maturase

GGTATCGACGGCGTCCGTGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGACGTGCGTATCAACGCGTGGTCAGCAACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGGCGGGCTACGTGAGACAGTATTGGCCAACCCTCAAGGTCAGGTTACTGGCCGGTGAATACCAGCCCCAAGCAGTGCGAGCGGTTG  >  NC_002947/1426219‑1426454
                                                                                                           |                                                                                                                                
ggTATCGACGGCGTCCGTGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGACGTGCGTATCAACGCGTGGTCAGCAACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACT                                                                                         <  1:54647‑M2/149‑1 (MQ=255)
 gTATCGACGGCGTCCGTGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGACGTGCGTATCAACGCGTGGTCAGCAACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTT                                                                                        >  3:81447‑M2/1‑149 (MQ=255)
 gTATCGACGGCGTCCGTGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGACGTGCGTATCAACGCGTGGTCAGCAACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTT                                                                                        <  6:299803‑M2/149‑1 (MQ=255)
                                                                                                     tCAGCAACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGttgctgaccacgcgttgatacgcacgtctgaggttggccggtgcaagcacccgctccatcagcgtgtccggctccgcgttcgtc   >  3:161412‑M2/1‑50 (MQ=255)
                                                                                                     tCAGCAACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGttgctgaccacgcgttgatacgcacgtctgaggttggccggtgcaagcacccgctccatcagcgtgtccggctccgcgttcgtc   <  4:161412‑M2/134‑85 (MQ=255)
                                                                                                          aacaaGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGttgctgaccacgcgttgatacgcacgtctgaggttggccggtgcaagcacccgctccatcagcgtgtccggctccgcgttcgtcc  >  6:82014‑M2/1‑45 (MQ=255)
                                                                                                           |                                                                                                                                
GGTATCGACGGCGTCCGTGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGACGTGCGTATCAACGCGTGGTCAGCAACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGGCGGGCTACGTGAGACAGTATTGGCCAACCCTCAAGGTCAGGTTACTGGCCGGTGAATACCAGCCCCAAGCAGTGCGAGCGGTTG  >  NC_002947/1426219‑1426454

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.