New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1799873	30 (0.510)	7 (0.140)	7/212	NT	22.0%	intergenic (+43/‑144)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
	?	NC_002947	= 1799915	25 (0.520)					intergenic (+85/‑102)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha

GAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATG  >  NC_002947/1799726‑1800019                                                                                                                                                     |                                                                                                                                                    gAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGctct                                                                                                                                                    <  1:59473/149‑1 (MQ=255) gAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCc                                                                                                                                                    >  3:275633‑M1/1‑148 (MQ=255)  tggCGTTGGCAGGTGTTGGGCCTAGGCCATTTCTTCGGGGTTCCTTCGCCCGGGGGGGGGGGGTTTGGTATGCGGGCTATGGGGTAACGTATTCCCTTATCTTACTTTTTGGGGCGGTTTGGGGGCCC‑TTCGCGGGCACGCCCGCtctc                                                                                                                                                   <  2:174050/148‑1 (MQ=255)     cGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTcaca                                                                                                                                                <  4:276822/149‑1 (MQ=255)     cGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTGCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTcaca                                                                                                                                                <  4:316846/149‑1 (MQ=255)      gTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAg                                                                                                                                               >  4:277589/1‑149 (MQ=255)            aCGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCTGCTTTGCAGCCC‑TTCGCGGGCACGCCCGCTCccaaacgtacgg                                                                                                                                         >  1:216191‑M1/1‑137 (MQ=255)            aCGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGAtt                                                                                                                                           >  8:144523/1‑147 (MQ=255)            aCGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCa                                                                                                                                         >  8:149411/1‑149 (MQ=255)              gTCTTGGGCCTACGCCCATTCTTCGGCGTTCCTTCGCCCTTGTTGGGGCGGCTTGTGATGCGCGCGAAGGCGTCACCGTTTCCCTGATATGACATATTGGGGCCGCTTCGCGTCCC‑TTCGCGGGCACGCCCGCTCTCTCAGGATTCAt                                                                                                                                        <  1:307894/148‑1 (MQ=37)               gcTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCg                                                                                                                                      <  7:344536/148‑1 (MQ=255)                    ggCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCt                                                                                                                                  <  6:167257/148‑1 (MQ=255)                      ccTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCtctc                                                                                                                                                   <  1:229177/129‑1 (MQ=255)                      ccTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCtctc                                                                                                                                                   >  2:229177/1‑129 (MQ=255)                           gCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGt                                                                                                                                    >  8:314320/1‑139 (MQ=255)                           gCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGt                                                                                                                                    <  7:314320/139‑1 (MQ=255)                                   aTCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCTGCTTTGCAGCCC‑TTCGCGGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaat                                                                                                                  >  4:371447‑M1/1‑114 (MQ=255)                                    tCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTAc                                                                                                                <  3:370754/149‑1 (MQ=255)                                        cGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCtgt                                                                                                            <  8:120082/149‑1 (MQ=255)                                        cGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCtgt                                                                                                            <  1:159255/149‑1 (MQ=255)                                         gTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCtgtg                                                                                                           <  1:118523/149‑1 (MQ=255)                                          ttCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtga                                                                                                           <  4:275633‑M1/149‑43 (MQ=255)                                          ttCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgt                                                                                                             >  2:11652‑M1/1‑107 (MQ=255)                                          ttCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCTGTgg                                                                                                          <  3:180975/149‑1 (MQ=255)                                             cTTCGCCCCGGTGCGGGGGGCTTGGGACGCGCGCGAAGGAGTCACGGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCTGTGGga                                                                                                        >  6:203808‑M2/1‑146 (MQ=255)                                              ttCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCGTTCGCGGGCACGCCCGCTCTCACAGGATTCAt                                                                                                                                        <  1:232946/117‑1 (MQ=255)                                              ttCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCAt                                                                                                                                        >  2:232946/1‑116 (MQ=255)                                                cGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCTGCTTTGCAGCCC‑TTCGCGGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagc                                                                                                       <  3:371447‑M1/147‑47 (MQ=255)                                                cGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCTGTGGgagcg                                                                                                     >  3:253913‑M2/1‑143 (MQ=255)                                                 gCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCTGCTTTGCAGCCC‑TTCGCGGGCACGCCCGCTCccacaggtacggccccagccgctcagaccgatgaatcctgtgagagcgg                                                                                                    <  1:43052‑M1/149‑50 (MQ=255)                                                  ccccGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggc                                                                                                   <  1:11652‑M1/149‑51 (MQ=255)                                                      ggTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCTGTGGgagcgggcgtgc                                                                                              <  3:219568‑M2/149‑13 (MQ=255)                                                        tGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCTGTGGgagcgggcgtgccc                                                                                            >  8:182837‑M2/1‑135 (MQ=255)                                                             gcggcTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCTGTGGgagcgggcgtgcccgcgaa                                                                                       >  4:219568‑M2/1‑130 (MQ=255)                                                                  ttGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCTGTGGgagcgggcgtgcccgc                                                                                          <  4:222409‑M2/141‑17 (MQ=255)                                                                  ttGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCTGTGGgagcgggcgtgcccgc                                                                                          >  3:222409‑M2/1‑125 (MQ=255)                                                                  ttGGCAAGCGCGCGAAGGCGTCCCCGATTCCCTTAACTCACCTTTTGGGGCCGGTGGGGGGCCC‑TTCGCGGGCACGCCCGCGCTCACAGGATTCTTCGGTCTGAGCGGG‑GGGGCGGTACCTGTGGGAGCGGGGGTGCCCGCGAAGGGCt                                                                                  <  8:156729/149‑1 (MQ=255)                                                                    gggAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACCCCCGCGCTCACAGGAATCATCGGGCTGAGCGGC‑GGGGCCGTACCTGGGGGAGCGGGCGTGGCCGCGAACGGCTg                                                                                 >  8:229048/1‑148 (MQ=38)                                                                          cgcgcgAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCCCGCCCGCTCTCACAGGATTCATCGGGCTGAGCGGC‑GGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAagca                                                                          <  7:29878/149‑1 (MQ=255)                                                                          cgcgcgAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAagca                                                                          <  8:179139/149‑1 (MQ=255)                                                                             gcgAAGGCGTCACCGATTCCCTGATCTGCCCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGcc                                                                       <  3:277589/149‑1 (MQ=255)                                                                                   gCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCaaa                                                                  >  2:233535/1‑148 (MQ=255)                                                                                     gTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCtgt                                                                                                            >  8:254739/1‑104 (MQ=255)                                                                                     gTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCtgt                                                                                                            <  7:254739/104‑1 (MQ=255)                                                                                      tccccGATTCCCTGATCTCACCTATTGGGGCCGCTTCGCGGCCC‑TGCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCTGTGGGCGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCaaaaaaa                                                              <  7:229048/146‑1 (MQ=255)                                                                                           gATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCTGGGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGcccc                                                         <  7:149411/149‑1 (MQ=255)                                                                                           gATTCCCTGATCTCACCTATTGGGGCCGCTGCGCGGCCC‑TGCGCGGGCACGCCCGCGCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGcccc                                                         <  7:144523/149‑1 (MQ=255)                                                                                                           cTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGTGCGGC‑GGGCCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATc                                         <  1:117556/149‑1 (MQ=255)                                                                                                                      gCTGCGCGGCCC‑TTCGCGGGCACGCCCGCTCACACAGGATTCATCGGGCTGCGCGGC‑GGGGCCGTACCTGGGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTc                              <  3:281409/149‑1 (MQ=38)                                                                                                                           gcgGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCCAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCGTGTCCtt                           >  6:350607/1‑147 (MQ=255)                                                                                                                                 c‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTg                   >  5:282976/1‑149 (MQ=255)                                                                                                                                   ttCGCGGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgc                   >  4:219568‑M1/1‑19 (MQ=255)                                                                                                                                      gcgGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaa                        <  4:222409‑M1/141‑126 (MQ=255)                                                                                                                                      gcgGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaa                        >  3:222409‑M1/1‑16 (MQ=255)                                                                                                                                        gggCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgca              >  8:182837‑M1/1‑14 (MQ=255)                                                                                                                                          gCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcacc            <  3:219568‑M1/149‑138 (MQ=255)                                                                                                                                              gCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccgggg       <  1:11652‑M2/149‑100 (MQ=255)                                                                                                                                                ccGCTCTCACAGGATTCATCGGTCTGAGCGGCTGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggctgcaaagcagccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggc      <  1:43052‑M2/149‑101 (MQ=255)                                                                                                                                                 cGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggcg      >  3:253913‑M1/1‑5 (MQ=255)                                                                                                                                                  gCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggctgcaaagcagccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggcg     <  3:371447‑M2/147‑102 (MQ=255)                                                                                                                                                   ctctCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATg  <  1:233535/149‑1 (MQ=255)                                                                                                                                                    tCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatccgtgactccttcgcgcgcgtcccaagccccccgcaccggggcgaag   >  6:203808‑M1/1‑2 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC‑TTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGC‑GGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATG  >  NC_002947/1799726‑1800019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.