New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2085878 =	NA (NA)	5 (0.090)	5/254	NT	NA	intergenic (+587/‑8)	PP_1864/PP_1865	hypothetical protein/transposase
	?	NC_002947	2085923 =	NA (NA)					coding (38/1302 nt)	PP_1865	transposase

GTCCGTTTGCGATGACGACGCCAACTCACCTTTCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGG  >  NC_002947/2085731‑2085910                                                                                                                                                    |                                 gTCCGTTTCCGATGACGACGCCAACTCACCTTTCCGCCCTAACGGCCAACCCTTTCAACGTCATCGCTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGCGCGATGTGGGCTGATGGACTAGCGCGATTCGAGAAACAAGCACCCGc                                  >  6:108132/1‑148 (MQ=14)  tCCGTTTGCGATGACGACGCCAACTCACCTTTCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCa                                <  6:181761/149‑1 (MQ=255)    cGTTTGCGATGACGACGCCAACTCACCTTTCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAg                               <  7:248735/148‑1 (MQ=255)      tttGCGATGACGACGCCAACTCACCTTTCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCg                             >  3:345642/1‑148 (MQ=255)          cGATGACGACGCCAACTCACCTTTCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATg                        <  3:73583/149‑1 (MQ=255)           gATGACGACGCCAACTCACCTTTCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGATGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATgg                       >  2:275219/1‑149 (MQ=255)             tgccgacgCCCACTCACCTTTCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGGGGGCTGATGTACTCGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGcc                     <  8:307168/146‑1 (MQ=255)                  acgCCAACTCACCTTTCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACt                >  3:95310/1‑149 (MQ=37)                      cAACTCACCTTTCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGcc            <  1:275219/149‑1 (MQ=33)                        aCTCACCTTTCCGCCCTTACGGACATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGTAATCCAGTCAGGAAGTCCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCtt          <  6:322865/149‑1 (MQ=12)                          tCACCTTTCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTgg        >  3:39606/1‑149 (MQ=32)                          tCACCTTTCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTg         >  6:242141/1‑148 (MQ=32)                          tCACCTTTCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTg         >  7:242858/1‑148 (MQ=32)                           cACCTTTCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAAc                 >  8:41215/1‑139 (MQ=32)                            aCCTTTCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTTGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGa       <  7:312631/148‑1 (MQ=17)                            aCCTTTCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATgg                       <  2:371724/132‑1 (MQ=32)                            aCCTTTCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATgg                       >  1:371724/1‑132 (MQ=32)                            aCCTTTCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGa       <  4:39606/148‑1 (MQ=32)                            aCCTTTCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGa       <  1:16535/148‑1 (MQ=32)                            aCCTTTCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAg      >  5:353423/1‑149 (MQ=32)                            aCCTTTCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGACCGATGTGGGCTGATGTACTAGCGCGATTAGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTTCCTTGCAg      >  8:78613/1‑149 (MQ=255)                                 tCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAgg  <  5:298030/148‑1 (MQ=31)                                 tCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAgg  <  6:112501/148‑1 (MQ=31)                                 tCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAg   <  6:119006/147‑1 (MQ=31)                                                                                                                                                    |                                 GTCCGTTTGCGATGACGACGCCAACTCACCTTTCCGCCCTTACGGCCATCCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGG  >  NC_002947/2085731‑2085910

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.