New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2678441	55 (0.930)	4 (0.070)	4/248	NT	6.4%	coding (782/1320 nt)	PP_2348	sensor histidine kinase
	?	NC_002947	= 2678519	65 (1.150)					coding (860/1320 nt)	PP_2348	sensor histidine kinase

TGGGGCAGATCAACCACTTGCTTAGCCATACCGAAGACAGCCTGCGCCGCTCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGGATGCGCTGCCGGGTGCGCAGTTCGATTGTGATGCCGAACTGCCGGGGTTGCTCGGGACC  >  NC_002947/2678297‑2678586                                                                                                                                                 |                                                                                                                                                  tggGGCAGATCAACCACTTGCTTAGCCATACCGAAGACAGCCTGCGCCGCTCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAg                                                                                                                                               <  4:333530/149‑1 (MQ=255) tggGGCAGATCAACCACTTGCTTAGCCATACCGAAGACAGCCTGCGCCGCTCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAg                                                                                                                                               <  2:43237/149‑1 (MQ=255)      cAGATCAACCACTTGCGTAGCCATACCGAAGACAGCCTGCGCCGCTCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTgcg                                                                                                                                          >  8:335427/1‑149 (MQ=255)          tCAACCACTTGCTTAGCCATACCGAAGACAGCCTGCGCCGCTCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTgcgcgcg                                                                                                                                      >  4:134378/1‑149 (MQ=255)            aaCCACTTGCTTAGCCATACCGAAGACAGCCTGCGCCGCTCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTgcgcgcgc                                                                                                                                     <  7:287427/148‑1 (MQ=255)                  ttGCTTAGCCATACCGAAGACAGCCTGCGCCGCTCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAg                                                                                                                                               <  1:84461/132‑1 (MQ=255)                  ttGCTTAGCCATACCGAAGACAGCCTGCGCCGCTCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAg                                                                                                                                               >  2:84461/1‑132 (MQ=255)                    gCTTAGCCATACCGAAGACAGCCTGCGCCGCTCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGt                                                                                                                             <  3:134378/148‑1 (MQ=255)                      ttAGCCATACCGAAGACAGCCTGCGCCGCTCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAg                                                                                                                          >  5:34998/1‑149 (MQ=255)                         gCCATACCGAAGACAGCCTGCGCCGCTCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCa                                                                                                                        <  6:11185/148‑1 (MQ=255)                                cGAAGACAGCCTGCGCCGCTCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGc                                                                                                                         >  1:327264/1‑140 (MQ=255)                                cGAAGACAGCCTGCGCCGCTCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGc                                                                                                                         <  2:327264/140‑1 (MQ=255)                                cGAAGACAGCCTGCGCCGCTCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTgcagc                                                                                                                <  6:34998/149‑1 (MQ=255)                                   aGACAGCCTGCGCCGCTCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGa                                                                                                             <  7:335427/149‑1 (MQ=255)                                     aCAGCCTGCGCCGCTCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGAt                                                                                                            >  6:305919/1‑148 (MQ=255)                                        gCCTGCGCCGCTCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAg                                                                                                        <  2:204120/149‑1 (MQ=255)                                         ccTGCGCCGCTCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAg                                                                                                        >  7:148797/1‑148 (MQ=255)                                          cTGCGCCGCTCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGa                                                                                                      <  2:259233/149‑1 (MQ=255)                                            gcgcCGCTCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAgc                                                                                                    >  6:58889/1‑149 (MQ=255)                                                  cTCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTgg                                                                                              >  1:200075/1‑149 (MQ=255)                                                   tCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGgc                                                                                             >  2:12940/1‑149 (MQ=255)                                                     aCGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCagacgtgcacggttcagctcgcgcgccaggcgctcctgaatctgctgcaactgctc                                                                                           >  3:100191‑M1/1‑93 (MQ=255)                                                     aCGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCa                                                                                                                        >  4:49814/1‑120 (MQ=255)                                                     aCGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCa                                                                                                                        <  3:49814/120‑1 (MQ=255)                                                     aCGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGgcgc                                                                                           >  7:355586/1‑149 (MQ=255)                                                      cGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGgcgcg                                                                                          >  4:141690/1‑149 (MQ=255)                                                         aaTGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGt                                                                                                                             >  7:201666/1‑111 (MQ=255)                                                         aaTGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGt                                                                                                                             <  8:201666/111‑1 (MQ=255)                                                           tGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGc                                                                                     <  3:141690/149‑1 (MQ=255)                                                             cccTCGGTAACCTCGGCCATGCGCTGAAGACGCTGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGgcgcgc                                                                                         >  4:287008/1‑143 (MQ=255)                                                             cccTCGGTAACCTCGGCCATGCGCTGAAGACGCTGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGgcgcgc                                                                                         <  3:287008/143‑1 (MQ=255)                                                              ccTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGAtt                                                                                                           <  6:250659/124‑1 (MQ=255)                                                              ccTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGAtt                                                                                                           >  5:250659/1‑124 (MQ=255)                                                                      aCCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGc                                                                           <  2:200075/148‑1 (MQ=255)                                                                        cTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTg                                                                            <  7:55034/145‑1 (MQ=255)                                                                        cTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTg                                                                            >  8:55034/1‑145 (MQ=255)                                                                        cTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACg                                                                        >  8:130384/1‑149 (MQ=255)                                                                               aTGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTggca                                                                 >  5:58889‑M2/1‑145 (MQ=255)                                                                               aTGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTgg                                                                   <  3:68465‑M2/147‑3 (MQ=255)                                                                                tGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTggcag                                                                >  6:203810‑M2/1‑144 (MQ=255)                                                                                   gcTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCagacgtgcacggttcagctcgcgcgccaggcgctcctgaatctgctgcaactgctcacgcatttgcgcgcgcacctccggcagacc                                                             <  4:100191‑M1/149‑87 (MQ=255)                                                                                   gcTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAggg                                                              >  5:230752/1‑148 (MQ=255)                                                                                   acTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAgggg                                                             <  5:378330/148‑1 (MQ=255)                                                                                      gAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGGATg                                                          >  4:336477/1‑149 (MQ=255)                                                                                       aaGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGTGTGAGCAGTT‑CAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGGATgcg                                                        >  5:106828/1‑149 (MQ=255)                                                                                          aCGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCagacgtgcacggttcagctcgcgcgccaggcgctcctgaatctgctgcaactgctcacgcatttgcgcgcgcacctccgg                                                                   <  2:337946‑M1/136‑81 (MQ=255)                                                                                          aCGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCagacgtgcacggttcagctcgcgcgccaggcgctcctgaatctgctgcaactgctcacgcatttgcgcgcgcacctccgg                                                                   >  1:337946‑M1/1‑56 (MQ=255)                                                                                            gccgcTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGGATGCGCTGc                                                    >  5:106199/1‑149 (MQ=255)                                                                                            gccgcTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGGATGCGCTGc                                                    >  6:32676/1‑149 (MQ=255)                                                                                                 tGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGGATGCGCTGCCGGGt                                               <  8:148797/149‑1 (MQ=255)                                                                                                         ttGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGaa                                                                                 <  3:133231/107‑1 (MQ=255)                                                                                                         ttGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGaa                                                                                 >  4:133231/1‑107 (MQ=255)                                                                                                            cTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGGATGCGCTGCCGGGTgcg                                            >  7:237350/1‑141 (MQ=255)                                                                                                            cTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGGATGCGCTGCCGGGTgcg                                            <  8:237350/141‑1 (MQ=255)                                                                                                            cTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGGATGCGCTGCCGGGTGCGCAGTTCGa                                    >  4:11964/1‑149 (MQ=255)                                                                                                               aGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGGATGCGCTGCCGGGTGCGCAGTTCGAtt                                  <  7:130384/148‑1 (MQ=255)                                                                                                                 ccTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGGATGCGCTGCCGGGTGCGCAGTTCGATtgt                                >  5:169542/1‑148 (MQ=255)                                                                                                                      cTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGGATGCGCTGCCGGGTGCGCAGTTCGATTGTGATGcc                          <  1:12940/149‑1 (MQ=255)                                                                                                                       ttCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGGATGCGCTGCCGGGTGCGCAGTTCGATTGTGATGcc                          >  6:197541/1‑148 (MQ=255)                                                                                                                           aGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGAATGCGCTGCCGGGTGCGCAGTTCGATTGTGATGCCGAACt                     >  1:149342/1‑149 (MQ=255)                                                                                                                              gACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGGATGCGCTGCCGGGTGCGCAGTTCGATTGTGATGCCGAACTGcc                  >  8:203102/1‑149 (MQ=255)                                                                                                                                  gCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGGATGCGCTGCCGGGTGCGCAGTTCGATTGTGATGCCGAACTGCCgggg              <  6:169542/149‑1 (MQ=255)                                                                                                                                   ccTGCAGGGTCTGCCGGAGGTGCGCGCGCATATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGGATGCGCTGCCGGGTGCGCAGTTCGATTGTGATGCCGAACTGCCGGGGt             <  8:355586/149‑1 (MQ=255)                                                                                                                                       cAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGGATGCGCTGCCGGGTGCGCAGTTCGATTGTGATGCCGAACTGCCGGGGTTGCt         <  3:336477/149‑1 (MQ=255)                                                                                                                                        aGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGGATGCGCTGCCGGGTGCGCAGTTCGATTGTGATGCCGAACTGCCggg               <  7:95268/142‑1 (MQ=255)                                                                                                                                        aGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGGATGCGCTGCCGGGTGCGCAGTTCGATTGTGATGCCGAACTGCCggg               >  8:95268/1‑142 (MQ=255)                                                                                                                                          ggTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTggcagaccctgcaggcggtcactggaagccaggctcagcaacaccgccagcggcgtcttcagc      <  4:100191‑M2/149‑64 (MQ=255)                                                                                                                                             cTGCCagacgtgcacggttcagctcgcgcgccaggcgctcctgaatctgctgcaactgctcacgcatttgcgcgcgcacctccggcagaccctgcaggcggtcactggaagccaggctcagcaacaccgccagcggcgtcttcagcgca   >  6:203810‑M1/1‑5 (MQ=255)                                                                                                                                              tGCCagacgtgcacggttcagctcgcgcgccaggcgctcctgaatctgctgcaactgctcacgcatttgcgcgcgcacctccggcagaccctgcaggcggtcactggaagccaggctcagcaacaccgccagcggcgtcttcagcgcat  >  5:58889‑M1/1‑4 (MQ=255)                                                                                                                                               gCCGGAGGTGCGCGCACAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGGATGCGCTGCCGGGTGCGCAGTTCg                                     <  4:277290/113‑1 (MQ=255)                                                                                                                                               gCCGGAGGTGCGCGCACAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGGATGCGCTGCCGGGTGCGCAGTTCg                                     >  3:277290/1‑113 (MQ=255)                                                                                                                                                ccagacgtgcacggttcagctcgcgcgccaggcgctcctgaatctgctgcaactgctcacgcatttgcgcgcgcacctccggcagaccctgcaggcggtcactggaagccaggctcagcaacaccgccagcggcgtcttcagcgcat  <  3:68465‑M1/147‑146 (MQ=255)                                                                                                                                                ccGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTggcagaccctgcaggcggtcactggaagccaggctcagcaacaccgccagcggcgt             <  2:337946‑M2/136‑57 (MQ=255)                                                                                                                                                ccGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTggcagaccctgcaggcggtcactggaagccaggctcagcaacaccgccagcggcgt             >  1:337946‑M2/1‑80 (MQ=255)                                                                                                                                                 |                                                                                                                                                  TGGGGCAGATCAACCACTTGCTTAGCCATACCGAAGACAGCCTGCGCCGCTCACGCAATGCCCTCGGTAACCTCGGCCATGCGCTGAAGACGCCGCTGGCGGTGTTGCTGAGCCTGGCTTCCAGTGACCGCCTGCAGGGTCTGCCGGAGGTGCGCGCGCAAATGCGTGAGCAGTTGCAGCAGATTCAGGAGCGCCTGGCGCGCGAGCTGAACCGTGCACGTCTGGCAGGGGATGCGCTGCCGGGTGCGCAGTTCGATTGTGATGCCGAACTGCCGGGGTTGCTCGGGACC  >  NC_002947/2678297‑2678586

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.