New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2948647	41 (0.700)	5 (0.090)	5/246	NT	11.1%	coding (435/591 nt)	PP_2582	heme oxygenase
	?	NC_002947	= 2948671	41 (0.730)					coding (411/591 nt)	PP_2582	heme oxygenase

CAAATACCTCACGCAGATGCACCCGATAACTGTCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCAATACAG‑CCATCCCAAGGCCTGGGCCGAGCTGACACGGACCGGTTGGGTGGGCG  >  NC_002947/2948502‑2948795                                                                                                                                                  |                                                                                                                                                      cAAATACCTCACGCAGATGCACCCGATAACTGTCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAg                                                                                                                                                      <  6:312282/147‑1 (MQ=255)        cTCACGCAGATGCACCCGATAACTGTCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGt                                                                                                                                             >  6:105834/1‑149 (MQ=255)             gCAGATGCACCCGATAACTGTCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCACCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCAACCGGGTGAGGGGCCAGGTGGCgg                                                                                                                                        >  3:276252/1‑149 (MQ=255)                gATGCACCCGATAACTGTCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGcc                                                                                                                                     <  1:129468/149‑1 (MQ=255)                    cACCCGATAACTGTCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAggggcccgccacctggcccct                                                                                                                                  <  2:257642‑M1/148‑22 (MQ=255)                     aCCCGATAACTGTCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCAtt                                                                                                                                >  3:85347/1‑149 (MQ=255)                     aCCCGATAACTGTCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCAtt                                                                                                                                <  4:85347/149‑1 (MQ=255)                      cacGATAACTGTCGAACGCTGCAATCGCCACCGCTACCAACTCTGCTTCCTCATGCTCCCCCAGAACCAGGCTGTCAAGACTGGCAACAAATTCGCGCCAATGAAGCGCTAGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTg                                                                                                                               >  5:84713/3‑149 (MQ=255)                       ccGATAACTGTCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAggggcccgccacctggcccctcacc                                                                                                                              <  2:243855‑M1/149‑26 (MQ=255)                         gATAACTGTCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGtcc                                                                                                                            <  7:114865‑M2/149‑4 (MQ=255)                              cTGTCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGTGCCAGGTGGCGGGCCCCATTGTCACCCTc                                                                                                                       <  7:206735/149‑1 (MQ=255)                               tGTCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCAtt                                                                                                                                <  7:107511/139‑1 (MQ=255)                               tGTCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCAtt                                                                                                                                >  8:107511/1‑139 (MQ=255)                               tGTCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTcc                                                                                                                      >  7:271926/1‑149 (MQ=255)                               tGTCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTc                                                                                                                       >  8:205487/1‑148 (MQ=255)                                 tCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAcaatggggcccgccacctggcccctcacccgga                                                                                                                      <  8:74040‑M1/147‑34 (MQ=255)                                        cTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCCGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCgaga                                                                                                             >  2:82549/1‑149 (MQ=255)                                        cTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGa                                                                                                             >  2:274711/1‑149 (MQ=255)                                         tGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGAc                                                                                                            >  3:212655/1‑149 (MQ=255)                                           cAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGAc                                                                                                            <  2:336371/147‑1 (MQ=255)                                                gCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCGGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCgt                                                                                                     <  2:49817/149‑1 (MQ=255)                                                  ccccccTACCACCTCTGCTTCCTCCTCCTCCCCCACCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCgtgt                                                                                                   <  4:276252/149‑1 (MQ=255)                                                  cccaGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCgtgt                                                                                                   <  6:84713/149‑1 (MQ=255)                                                          ccaccTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTa                                                                                            <  7:205487/148‑1 (MQ=255)                                                                 tGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCgt                                                                                                     <  6:296062/132‑1 (MQ=255)                                                                 tGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCgt                                                                                                     >  5:296062/1‑132 (MQ=255)                                                                   cTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAcaatggggcccgccacctggcccctcacccggat                                                                                                                     <  1:150309‑M1/114‑35 (MQ=255)                                                                   cTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAcaatggggcccgccacctggcccctcacccggat                                                                                                                     >  2:150309‑M1/1‑80 (MQ=255)                                                                   cTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAAcgcc                                                                                  >  3:110382/1‑149 (MQ=255)                                                                   cTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAAAGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAAc                                                                                     <  8:271926/146‑1 (MQ=255)                                                                      cctcctGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTag                                                                                           >  8:321279/1‑137 (MQ=255)                                                                      cctcctGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTag                                                                                           <  7:321279/137‑1 (MQ=255)                                                                        tcctGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGcccc                                                                             >  4:193594/1‑149 (MQ=255)                                                                         cctGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGc                                                                                                 <  3:58615/128‑1 (MQ=255)                                                                         cctGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGc                                                                                                 >  4:58615/1‑128 (MQ=255)                                                                          ctGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCa                                                                           <  4:110382/149‑1 (MQ=255)                                                                             cTCCCCCAGCACCACGCTGTCCAGCCTGGCAACAAATTCGCGACAATGCAGCGCTCGGCCATCCCGGTGAGGGGCCAGGTGGAGGGCCCCATTGTCACCCACCAGCCCAAGAAGTTGCCAGTGCTTGTAGAGAAACGCCGCCACCAGGt                                                                        >  2:2329/1‑149 (MQ=255)                                                                                ccccAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAAcgc                                                                                   >  5:178300/1‑135 (MQ=255)                                                                                ccccAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAAcgc                                                                                   <  6:178300/135‑1 (MQ=255)                                                                                ccccAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTc                                                                      <  1:2329/148‑1 (MQ=255)                                                                                      cACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCtt                                                               <  1:274711/149‑1 (MQ=255)                                                                                       aCCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTc                                                              <  3:193594/149‑1 (MQ=255)                                                                                           ggCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAgg                                                                                                                                                     >  3:331844/1‑58 (MQ=255)                                                                                           ggCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAgg                                                                                                                                                     <  4:331844/58‑1 (MQ=255)                                                                                             cTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCa                                                        <  5:105834/149‑1 (MQ=255)                                                                                              tGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCaa                                                       >  8:337338/1‑149 (MQ=255)                                                                                                   aGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCAATACAg                                                  >  8:145806/1‑149 (MQ=255)                                                                                                     ccTGGCAACAACTTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCATGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCAATACAG‑cc                                               <  6:372693/149‑1 (MQ=255)                                                                                                     ccTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCAATACAG‑cc                                               <  4:212655/149‑1 (MQ=255)                                                                                                                           tGCAGCGCTCGTCCATCCGGGTGATGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCTCCCCCAGGTTCGAACCTTCACTGCAATACAG‑CCATCCCAAGGCCTGGGCCGAGCt                         <  2:300059/149‑1 (MQ=255)                                                                                                                                         aTCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGtcacccggatggccgagcgctgcattggcgcgaatttgttgccaggctggacagcctggtgctgggggagcaggaggaag                                               >  2:150309‑M2/1‑34 (MQ=255)                                                                                                                                         aTCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGtcacccggatggccgagcgctgcattggcgcgaatttgttgccaggctggacagcctggtgctgggggagcaggaggaag                                               <  1:150309‑M2/114‑81 (MQ=255)                                                                                                                                          tCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGtcacccggatggccgagcgctgcattggcgcgaatttgttgccaggctggacagcctggtgctgggggagcaggaggaagcagaggtggtagcgggggcgattgcagcgttcga             <  8:74040‑M2/147‑115 (MQ=255)                                                                                                                                              ggTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCAATACAG‑CCATCCCAAGGCCTGGGCCGAGCTGACACGGACCGGTtgggtg      >  4:23488/1‑149 (MQ=255)                                                                                                                                              ggTGAGGGGCCAGGTGGCGGGCCCC‑‑‑cacccggatggccgagcgctgcattggcgcgaatttgttgccaggctggacagcctggtgctgggggagcaggaggaagcagaggtggtagcgggggcgattgcagcgttcgacagttatcgg     <  2:243855‑M2/149‑124 (MQ=255)                                                                                                                                                ggacaatggggcccgccacctggcccctcacccggatggccgagcgctgcattggcgcgaatttgttgccaggctggacagcctggtgctgggggagcaggaggaagcagaggtggtagcgggggcgattgcagcgttcgacagttatc     <  7:114865‑M1/148‑147 (MQ=255)                                                                                                                                                  aGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCCAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCAATACAGTCCATCCCAAGGCCTGGGCCGAGCTGACACGGACCGGTTGGGTGGGc   <  1:82549/149‑1 (MQ=255)                                                                                                                                                  aGGGGCCAGGTGGCGGGCCCC‑‑‑cacccggatggccgagcgctgcattggcgcgaatttgttgccaggctggacagcctggtgctgggggagcaggaggaagcagaggtggtagcgggggcgattgcagcgttcgacagttatcgggtg  <  2:257642‑M2/148‑127 (MQ=255)                                                                                                                                                  |                                                                                                                                                      CAAATACCTCACGCAGATGCACCCGATAACTGTCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCAATACAG‑CCATCCCAAGGCCTGGGCCGAGCTGACACGGACCGGTTGGGTGGGCG  >  NC_002947/2948502‑2948795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.