New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2948647	41 (0.700)	5 (0.090)	5/246	NT	11.1%	coding (435/591 nt)	PP_2582	heme oxygenase
	?	NC_002947	= 2948671	41 (0.730)					coding (411/591 nt)	PP_2582	heme oxygenase

CCCGATAACTGTCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCA‑ATACAG‑CCATCCCAAGGCCTGGGCCGAGCTGACACGGACCGGTTGGGTGGGCGTTGGCAGCGGCAGGCCGAGG  >  NC_002947/2948523‑2948815                                                                                                                                                     |                                                                                                                                                   cacGATAACTGTCGAACGCTGCAATCGCCACCGCTACCAACTCTGCTTCCTCATGCTCCCCCAGAACCAGGCTGTCAAGACTGGCAACAAATTCGCGCCAATGAAGCGCTAGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTg                                                                                                                                                    >  5:84713/3‑149 (MQ=255)    gATAACTGTCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGtcc                                                                                                                                                 <  7:114865‑M2/149‑4 (MQ=255)         cTGTCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGTGCCAGGTGGCGGGCCCCATTGTCACCCTc                                                                                                                                            <  7:206735/149‑1 (MQ=255)          tGTCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTcc                                                                                                                                           >  7:271926/1‑149 (MQ=255)          tGTCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTc                                                                                                                                            >  8:205487/1‑148 (MQ=255)                   cTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCCGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCgaga                                                                                                                                  >  2:82549/1‑149 (MQ=255)                   cTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGa                                                                                                                                  >  2:274711/1‑149 (MQ=255)                    tGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGAc                                                                                                                                 >  3:212655/1‑149 (MQ=255)                      cAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGAc                                                                                                                                 <  2:336371/147‑1 (MQ=255)                           gCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCGGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCgt                                                                                                                          <  2:49817/149‑1 (MQ=255)                             ccccccTACCACCTCTGCTTCCTCCTCCTCCCCCACCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCgtgt                                                                                                                        <  4:276252/149‑1 (MQ=255)                             cccaGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCgtgt                                                                                                                        <  6:84713/149‑1 (MQ=255)                                     ccaccTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTa                                                                                                                 <  7:205487/148‑1 (MQ=255)                                            tGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCgt                                                                                                                          <  6:296062/132‑1 (MQ=255)                                            tGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCgt                                                                                                                          >  5:296062/1‑132 (MQ=255)                                              cTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAAcgcc                                                                                                       >  3:110382/1‑149 (MQ=255)                                              cTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAAAGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAAc                                                                                                          <  8:271926/146‑1 (MQ=255)                                                 cctcctGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTag                                                                                                                <  7:321279/137‑1 (MQ=255)                                                 cctcctGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTag                                                                                                                >  8:321279/1‑137 (MQ=255)                                                   tcctGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGcccc                                                                                                  >  4:193594/1‑149 (MQ=255)                                                    cctGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGc                                                                                                                      >  4:58615/1‑128 (MQ=255)                                                    cctGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGc                                                                                                                      <  3:58615/128‑1 (MQ=255)                                                     ctGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCa                                                                                                <  4:110382/149‑1 (MQ=255)                                                        cTCCCCCAGCACCACGCTGTCCAGCCTGGCAACAAATTCGCGACAATGCAGCGCTCGGCCATCCCGGTGAGGGGCCAGGTGGAGGGCCCCATTGTCACCCACCAGCCCAAGAAGTTGCCAGTGCTTGTAGAGAAACGCCGCCACCAGGt                                                                                             >  2:2329/1‑149 (MQ=255)                                                           ccccAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAAcgc                                                                                                        >  5:178300/1‑135 (MQ=255)                                                           ccccAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAAcgc                                                                                                        <  6:178300/135‑1 (MQ=255)                                                           ccccAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTc                                                                                           <  1:2329/148‑1 (MQ=255)                                                                 cACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCtt                                                                                    <  1:274711/149‑1 (MQ=255)                                                                  aCCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTc                                                                                   <  3:193594/149‑1 (MQ=255)                                                                        cTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCa                                                                             <  5:105834/149‑1 (MQ=255)                                                                         tGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCa‑a                                                                           >  8:337338/1‑149 (MQ=255)                                                                              aGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCA‑ATACAg                                                                      >  8:145806/1‑149 (MQ=255)                                                                                ccTGGCAACAACTTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCATGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCA‑ATACAG‑cc                                                                   <  6:372693/149‑1 (MQ=255)                                                                                ccTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCA‑ATACAG‑cc                                                                   <  4:212655/149‑1 (MQ=255)                                                                                                      tGCAGCGCTCGTCCATCCGGGTGATGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCTCCCCCAGGTTCGAACCTTCACTGCA‑ATACAG‑CCATCCCAAGGCCTGGGCCGAGCt                                             <  2:300059/149‑1 (MQ=255)                                                                                                                    aTCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGtcacccggatggccgagcgctgcattggcgcgaatttgttgccaggctggacagcctggtgctgggggagcaggaggaag                                                                    >  2:150309‑M2/1‑34 (MQ=255)                                                                                                                    aTCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGtcacccggatggccgagcgctgcattggcgcgaatttgttgccaggctggacagcctggtgctgggggagcaggaggaag                                                                    <  1:150309‑M2/114‑81 (MQ=255)                                                                                                                     tCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGtcacccggatggccgagcgctgcattggcgcgaatttgttgccaggctggacagcctggtgctgggggagcaggaggaagcagaggtggtagcgggggcgattgcagcgttcga                                  <  8:74040‑M2/147‑115 (MQ=255)                                                                                                                         ggTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCA‑ATACAG‑CCATCCCAAGGCCTGGGCCGAGCTGACACGGACCGGTtgggtg                          >  4:23488/1‑149 (MQ=255)                                                                                                                         ggTGAGGGGCCAGGTGGCGGGCCCC‑‑‑cacccggatggccgagcgctgcattggcgcgaatttgttgccaggctggacagcctggtgctgggggagcaggaggaagcagaggtggtagcgggggcgattgcagcgttcgacagttatcgg                          <  2:243855‑M2/149‑124 (MQ=255)                                                                                                                             aGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCCAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCA‑ATACAGTCCATCCCAAGGCCTGGGCCGAGCTGACACGGACCGGTTGGGTGGGc                       <  1:82549/149‑1 (MQ=255)                                                                                                                             aGGGGCCAGGTGGCGGGCCCC‑‑‑cacccggatggccgagcgctgcattggcgcgaatttgttgccaggctggacagcctggtgctgggggagcaggaggaagcagaggtggtagcgggggcgattgcagcgttcgacagttatcgggtg                       <  2:257642‑M2/148‑127 (MQ=255)                                                                                                                               gggCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCA‑ATACAG‑CCAt                                                                 <  2:237240/104‑1 (MQ=255)                                                                                                                               gggCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCA‑ATACAG‑CCAt                                                                 >  1:237240/1‑104 (MQ=255)                                                                                                                                  ccAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCA‑ATACAG‑CCATCCCAAGGCCTGGGCCGAGCTGACACGGACCGGTTGGGTGGGCGTTgg                  >  1:206799/1‑148 (MQ=255)                                                                                                                                      gTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCACGTTCGAACCTTCACTGCA‑ATACAG‑CCATCCCAAGGCCTGGGCCGAGCTGACACGGACCGGTTGGGTGGGCGTTGGCAGCg             >  8:32687/1‑149 (MQ=255)                                                                                                                                        ggCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCA‑ATACAG‑CCATCCCAAGGCCTGGGCCGAGCTGACACGGACCGGTTGGGTGGGCGTTGGCAGCGGc           <  3:23488/149‑1 (MQ=255)                                                                                                                                         gCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCA‑ATACAG‑CCATCCCAAGGCCTGGGCCGAGCTGACACGGACCGGTTGGGTGGGCGTTGGCAGCGGc           <  7:145806/148‑1 (MQ=255)                                                                                                                                               cccATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCA‑ATACAG‑CCATCCCAAGGCCTGGGCCGAGCTGACACGGACCGGTTGGGTGGGCGtt                    <  7:73729/133‑1 (MQ=255)                                                                                                                                               cccATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCA‑ATACAG‑CCATCCCAAGGCCTGGGCCGAGCTGACACGGACCGGTTGGGTGGGCGtt                    >  8:73729/1‑133 (MQ=255)                                                                                                                                                ccATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCA‑ATACAG‑CCATCCCAAGGCCTGGGCCGAGCTGACACGGACCGGTTGGGTGGGCGTTGGCAGCGGCAGGCCGAg   <  7:32687/149‑1 (MQ=255)                                                                                                                                                 cATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCA‑ATACAG‑CCATCCCAAGGCCTGGGCCGAGCTGACACGGACCgg                                 >  2:71607/1‑118 (MQ=255)                                                                                                                                                 cATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCA‑ATACAG‑CCATCCCAAGGCCTGGGCCGAGCTGACACGGACCGGTTGGGTGGGCGTTGGCAGCGGCAGGCCGa    >  4:353053/1‑147 (MQ=255)                                                                                                                                                 cATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCA‑ATACAG‑CCATCCCAAGGCCTGGGCCGAGCTGACACGGACCGGTTGGGTGGGCGTTGGCAGCGGCAGGCCGa    <  3:353053/147‑1 (MQ=255)                                                                                                                                                 cATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCA‑ATACAG‑CCATCCCAAGGCCTGGGCCGAGCTGACACGGACCGGTTGGGTGGGCGTTGGCAGCGGCAGGCCGAgg  >  7:21218/1‑149 (MQ=255)                                                                                                                                                 cATTGTCACCCTCCACCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCACATACAG‑CCATCCCAAGGCCTGGGCCGAGCTGACACGGACCgg                                 <  1:71607/119‑1 (MQ=255)                                                                                                                                                     gTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACt                                                                                >  4:235177/1‑69 (MQ=255)                                                                                                                                                     gTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACt                                                                                <  3:235177/69‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CCCGATAACTGTCGAACGCTGCAATCGCCCCCGCTACCACCTCTGCTTCCTCCTGCTCCCCCAGCACCAGGCTGTCCAGCCTGGCAACAAATTCGCGCCAATGCAGCGCTCGGCCATCCGGGTGAGGGGCCAGGTGGCGGGCCCCATTGTCACCCTCCAGCCCAAGACGTTGCGTGTGCTTGTAGAGAAACGCCGCCCCCAGGTTCGAACCTTCACTGCA‑ATACAG‑CCATCCCAAGGCCTGGGCCGAGCTGACACGGACCGGTTGGGTGGGCGTTGGCAGCGGCAGGCCGAGG  >  NC_002947/2948523‑2948815

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.