New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3861236 =56 (0.950)3 (0.050) 3/246 NT 5.5% coding (159/3282 nt) PP_3413 two‑component system sensor histidine kinase/response regulator
?NC_002947 3861283 = 49 (0.870)coding (206/3282 nt) PP_3413 two‑component system sensor histidine kinase/response regulator

CTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGCAGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGCCGGCATCATCGGCGAACAGCTGGACATCCCCATTGAAGTACGTCGTTTTGA  >  NC_002947/3861090‑3861382
                                                                                                                                                  |                                                                                                                                                  
gtcgatacggccatcacgcagggcagtgatggcctcgtgacggctgtcaaaacgacgtacttcaatggggatgtccagctgttcgccgatgatgccggcgtagtctgcgctcagtccctcatagtcatgctggctgacgttgatttCg                                                                                                                                                   <  6:290373‑M1/2‑1 (MQ=255)
 tGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGCAGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGaa                                                                                                                                                 >  6:155386/1‑149 (MQ=255)
   gatacggccatcacgcagggcagtgatggcctcgtgacggctgtcaaaacgacgtacttcaatggggatgtccagctgttcgccgatgatgccggcgtagtctgcgctcagtccctcatagtcatgctggctgacgttgatttCGAAc                                                                                                                                                >  7:80028‑M1/144‑148 (MQ=255)
   gatacggccatcacgcagggcagtgatggcctcgtgacggctgtcaaaacgacgtacttcaatggggatgtccagctgttcgccgatgatgccggcgtagtctgcgctcagtccctcatagtcatgctggctgacgttgatttCGAACg                                                                                                                                               >  1:61214‑M1/144‑149 (MQ=255)
            cTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGCAGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAAt                                                                                                                                      <  5:155386/149‑1 (MQ=255)
             ttCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGCAGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATg                                                                                                                                     >  4:171153/1‑149 (MQ=255)
                  gCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGCAGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATggg                                                                                                                                   <  4:78340/146‑1 (MQ=255)
                  gCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGCAGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCa                                                                                                                                 <  4:196528/148‑1 (MQ=255)
                   cTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGCAGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGt                                                                                                                               <  1:213307/149‑1 (MQ=255)
                     aTCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGCAGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTgc                                                                                                                             >  4:354039/1‑149 (MQ=255)
                         gTCTGGCCAACTCCACGGAACTGCAGGCCAGCAGTGAACCACGCCATCTGCTGGCGCGCTCCATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGAACGCCACTGGCTGAAACAACGCGAACCCCTGGTAATGGGCAGTgctcga                                                                                                                         >  7:76156/1‑148 (MQ=255)
                            tGGCCAACTCCACGGAACTGCAGGCCAGCAGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGcccc                                                                                                                      >  8:309632/1‑149 (MQ=255)
                                 aaCTCCACGGAACTGCAGGCCAGCAGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTa                                                                                                                 >  4:347384/1‑149 (MQ=255)
                                 aaCTCCACGGAACTGCAGGCCAGCAGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTa                                                                                                                 <  2:164912/149‑1 (MQ=255)
                                    tCCACGGAACTGCAGGCCAGCAGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTAccc                                                                                                              >  7:237664/1‑149 (MQ=255)
                                      cACGGAACTGCAGGCCAGCAGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTAccccc                                                                                                            >  4:239514/1‑149 (MQ=255)
                                               caaaacgacgtacttcaatggggatgtccagctgttcgccgatgatgccggcgtagtctgcgctcagtccctcatagtcatgctggctgacgttgatttCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCg                                                                                                      <  6:167867‑M1/47‑1 (MQ=255)
                                               caaaacgacgtacttcaatggggatgtccagctgttcgccgatgatgccggcgtagtctgcgctcagtccctcatagtcatgctggctgacgttgatttCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCg                                                                                                      >  5:167867‑M1/100‑146 (MQ=255)
                                                aaaacgacgtacttcaatggggatgtccagctgttcgccgatgatgccggcgtagtctgcgctcagtccctcatagtcatgctggctgacgttgatttCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAAt                                                                                                  >  4:170307‑M1/99‑149 (MQ=255)
                                                     cagcagTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACg                                                                                             >  3:87787/1‑149 (MQ=255)
                                                             aaCCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCCGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTcagccag                                                                                     >  2:187555/1‑149 (MQ=255)
                                                              aCCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTcagccagc                                                                                    <  4:87787/149‑1 (MQ=255)
                                                               caactacATCTGCTGGCGCGCTCGATCATTGACGCTGACCCACTGACGTTATACGTCGATGATCGCCACTGGCTGAAACAACGCGAACTCCTGGTAATGGGCAGTGCGCGCCCAGATGACACCCAGTTAGAAATAAACGTCAGACAGCa                                                                                   >  7:301584/7‑149 (MQ=255)
                                                                cACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCAt                                                                                  <  3:171153/149‑1 (MQ=255)
                                                                  cGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGa                                                                                <  1:140928/149‑1 (MQ=255)
                                                                     cATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTgcgc                                                                                                                           >  5:372747/1‑103 (MQ=255)
                                                                     cATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTgcgc                                                                                                                           <  6:372747/103‑1 (MQ=255)
                                                                     cATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTa                                                                             >  2:367530/1‑149 (MQ=255)
                                                                     cATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTa                                                                             <  6:67356/149‑1 (MQ=255)
                                                                           ctgGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGa                                                                          <  3:347384/146‑1 (MQ=255)
                                                                           ctgGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGa                                                                          <  8:237664/146‑1 (MQ=255)
                                                                           ctgGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAg                                                                         <  6:361701/147‑1 (MQ=255)
                                                                            tgGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAggg                                                                       >  1:161209/1‑148 (MQ=255)
                                                                                        tCAGTGCCGCTGCCACACTGACGTTATCAGGCGAGGATCGCCACTGGCTGAAACAACTCGAACTCCTGGTAATGGGCAGTGCTCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCa                                                             <  3:242629/146‑1 (MQ=255)
                                                                                          aGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACt                                                                    <  7:128346/137‑1 (MQ=255)
                                                                                          aGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACt                                                                    >  8:128346/1‑137 (MQ=255)
                                                                                          aGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTa                                                        >  3:325959/1‑149 (MQ=255)
                                                                                           gTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTAc                                                       <  2:161209/149‑1 (MQ=255)
                                                                                            tGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACt                                                                              <  4:335206/125‑1 (MQ=255)
                                                                                            tGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACt                                                                              >  3:335206/1‑125 (MQ=255)
                                                                                              ccGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGcc                                                    >  5:238686/1‑149 (MQ=255)
                                                                                               cGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGCCg                                                   <  7:309632/149‑1 (MQ=255)
                                                                                                      ccACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTca                                                                                          <  5:78208/103‑1 (MQ=255)
                                                                                                      ccACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTca                                                                                          >  6:78208/1‑103 (MQ=255)
                                                                                                       cACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGCCGGCatcatc                                           >  2:299274/1‑149 (MQ=255)
                                                                                                            aCGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGCCGGCatcatc                                           >  8:283363/1‑144 (MQ=255)
                                                                                                            aCGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGCCGGCatcatc                                           <  7:283363/144‑1 (MQ=255)
                                                                                                                 aTCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGCCGGCATCATAGGCGAACAGc                                 >  3:102174/1‑149 (MQ=255)
                                                                                                                  tCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGCCTACGCCGGCATCATCGGCGAACAGCt                                >  3:35218/1‑149 (MQ=255)
                                                                                                                    cGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGCCGGCATCATCGGCGAACAGCTg                               <  1:367530/148‑1 (MQ=255)
                                                                                                                    cGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGCCGGCATCATCGGCGAACAGCTg                               <  1:95144/148‑1 (MQ=255)
                                                                                                                     ggCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGCCGGCATCATCGGCGAACAGCTGGa                             >  1:269409/1‑149 (MQ=255)
                                                                                                                          tgatCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGCCGGCATCATCGGCGAACAGCTGGACATcc                        <  3:354039/149‑1 (MQ=255)
                                                                                                                           gatCGGCACTGGCTTAATCAAGGCGAACGCCTGGTATTGGGCTGTGGGCGCCCCGATTACCCCCCGTTGGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGCCGTCATCATCTGCTAACAGCTGGACATcc                        <  8:76156/148‑1 (MQ=255)
                                                                                                                            atCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGCCGGCATCATCGGCGAACAGCTGGACATcccc                      <  1:299274/149‑1 (MQ=255)
                                                                                                                              cGCCAGTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGCCGGCATCATCGGCGAACAGCTGGACATCCCCAt                    >  7:339929/1‑149 (MQ=255)
                                                                                                                               gCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGCCGGCATCATCGGCGAACAGCTGGACATCCCCAtt                   >  5:290373/1‑149 (MQ=255)
                                                                                                                                 cACTGGCTGAAACAACGCGAACGACTGGTACTGGGCAGTGCGCTCCCCGAGTACCCCCAGTTCGAAATCAACGTCATACAGCATGACTATGAGGGACTGAGAGAATACTACGCAGGCATCATCGTCGAACAGCTTGACATCCCCa                     <  8:301584/145‑1 (MQ=255)
                                                                                                                                    tGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGCCGGCATCATCGGCGAACAGCTGGACATCCCCATTGAAg               >  3:175083/1‑148 (MQ=255)
                                                                                                                                      gCTGAAACTACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCTCAGACTACGCCGGCATCATCGGCGAACAGCTGGACATCCCCATTGAAGt              <  4:300518/147‑1 (MQ=255)
                                                                                                                                        tGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTAc                                                                                                                >  7:150617/1‑47 (MQ=255)
                                                                                                                                        tGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTAc                                                                                                                <  8:150617/47‑1 (MQ=255)
                                                                                                                                            acaacGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGCCGGCATCATCGGCGAACAGCTGGACATCCCCATTGAAGTACGTCGtt      <  2:269409/149‑1 (MQ=255)
                                                                                                                                             caacGCGAACGCCTGGTAATGGCCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCACCGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGCCGGCATCAACGGCGAACAGCTGGACATCCCCAGTGAAGTACGTCGttt     >  3:195489/1‑149 (MQ=255)
                                                                                                                                              aacGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGCCGGCATCATCGGCGAACAGCTGGACATCCCCATTGAAGTACGTCGtttt    <  3:239514/149‑1 (MQ=255)
                                                                                                                                              aacGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGCCGGCATCATCGGCGAACAGCTGGACATCCCCATTGAAGTACGTCGtttt    >  6:153215/1‑149 (MQ=255)
                                                                                                                                              aacGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGCCGGCATCATCGGCGAACAGCTGGACATCCCCATTGAAGTACGTCGtttt    <  1:187555/149‑1 (MQ=255)
                                                                                                                                                cgcgAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGCCGGCATCATCGGCGAACAGCTGGACATCCCCATTGAAGTACGTCGTTTTGa  <  8:339929/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
CTGGCGAGCGTCCTTCTGGCTATCGGTCTGGCCAACTCCACGGAACTGCAGGCCAGCAGTGAACCACGCCATCTGCTGGCGCGCTCGATCAGTGCCGCTGCCCCACTGACGTTATCCGGCGATGATCGCCACTGGCTGAAACAACGCGAACGCCTGGTAATGGGCAGTGCGCGCCCCGATTACCCCCCGTTCGAAATCAACGTCAGCCAGCATGACTATGAGGGACTGAGCGCAGACTACGCCGGCATCATCGGCGAACAGCTGGACATCCCCATTGAAGTACGTCGTTTTGA  >  NC_002947/3861090‑3861382

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.