New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4536700 =	NA (NA)	5 (0.090)	4/248	NT	7.9%	coding (35/1533 nt)	PP_4025	transposase
	?	NC_002947	= 4627423	61 (1.040)					coding (81/1533 nt)	PP_4091	transposase

CGCAACCGTCCGCATCAGGTTTTGACTCCTCGTTTCGTCGCCTGACCGGGTATAATCCGGGCCATGATTTCAGTGCCCGATAACCTTCCTGACGACCCTGCCGCGCTCAAACTACTGCTTGCGCAGTTGTTGGCCGAGCGCACGGTCGA  >  NC_002947/4536603‑4536751                                                                                                  |                                                    cgaaaCCGTCCGCATCAGGTTTTGACTCCTCGTTTCGTCTCCTGACCGGGTATAATCCGGGCCATGATTTCAGTGCCCGATAACCTTCCTGACGACCCTGCCGCTCTCAAACTACTTCTTGCGCATTTGTTGGCCGAGCGCACGGTCGa  <  5:359877/146‑1 (MQ=1)                                                                                                  |                                                    CGCAACCGTCCGCATCAGGTTTTGACTCCTCGTTTCGTCGCCTGACCGGGTATAATCCGGGCCATGATTTCAGTGCCCGATAACCTTCCTGACGACCCTGCCGCGCTCAAACTACTGCTTGCGCAGTTGTTGGCCGAGCGCACGGTCGA  >  NC_002947/4536603‑4536751

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.