New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5182288	63 (1.070)	5 (0.090)	5/240	NT	7.3%	intergenic (‑13/‑223)	csbD/PP_4562	stress response protein/hypothetical protein
	?	NC_002947	= 5182340	69 (1.260)					intergenic (‑65/‑171)	csbD/PP_4562	stress response protein/hypothetical protein

CGCCTCGCCTTTGAGCTCCTGCGCCTTGCCTTCGGCCCGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACGGCAGGCGAATACCGCCCAAGCCCGCGAAGAGGCCGGCACTGGCACCGCAA  >  NC_002947/5182141‑5182436                                                                                                                                                    |                                                                                                                                                     cgcctcgcctTTGAGCTCCTGCGCCTTGCCTTCGGCCCGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGc                                                                                                                                                     <  8:42846/149‑1 (MQ=255) cgcctcgcctTTGAGCTCCTGCGCCTTGCCTTCGGCCCGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGc                                                                                                                                                     <  1:188899/149‑1 (MQ=255) cgcctcgcctTTGAGCTCCTGCGCCTTGCCTTCGGCCCGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTG                                                                                                                                                      >  7:42846‑M1/1‑148 (MQ=255)     tcgcctTTGAGCTCCTGCGCCTTGCCTTCGGCCCGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAAt                                                                                                                                                 >  6:266083/1‑149 (MQ=255)     tcgcctTTGAGCTCCTGCGCCTTGCCTTCGGCCCGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAAt                                                                                                                                                 >  3:143381/1‑149 (MQ=255)       gcctTTGAGCTCCTGCGCCTTGCCTTCGGCCCGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATg                                                                                                                                                >  7:151608/1‑148 (MQ=255)        cctTTGAGCTCCTGCGCCTTGCCTTCGGCCCGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGga                                                                                                                                              <  6:7865/149‑1 (MQ=255)        cctTTGAGCTCCTGCGCCTTGCCTTCGGCCCGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGga                                                                                                                                              <  4:192303/149‑1 (MQ=255)         ctTTGAGCTCCTGCGCCTTGCCTTCGGCCCGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATg                                                                                                                                                >  6:379734/1‑146 (MQ=255)         ctTTGAGCTCCTGCGCCTTGCCTTCGGCCCGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATg                                                                                                                                                >  3:322196/1‑146 (MQ=255)         ctTTGAGCTCCTGCGCCTTGCCTTCGGCCCGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGga                                                                                                                                              <  5:379734/148‑1 (MQ=255)              aGCTCCTGCGCCTTGCCTTCGGCCCGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGacac                                                                                                                                         <  6:20032/148‑1 (MQ=255)              aGCTCCTGCGCCTTGCCTTCGGCCCGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGacac                                                                                                                                         <  6:150010/148‑1 (MQ=255)               gCTCCTGCGCCTTGCCTTCGGCCCGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGt                                                                                                                                       <  8:103793/149‑1 (MQ=255)                cTCCTGCGCCTTGCCTTCGGCCCGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTg                                                                                                                                      <  7:72766/149‑1 (MQ=255)                   cTGCGCCTTGCCTTCGGCCCGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAAc                                                                                                                                   >  3:58997/1‑149 (MQ=255)                   cTGCGCCTTGCCTTCGGCCCGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAAc                                                                                                                                   >  3:315944/1‑149 (MQ=255)                             ccttCGGCCCGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGa                                                                                                                           >  8:2431/1‑147 (MQ=255)                                tCGGCCCGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGaa                                                                                                                      >  5:94147/1‑149 (MQ=255)                                     ccGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTATGTCTTTAGTACCGCTCATGGCAAAACTCCTGgcccaggcgttgggtcaaccttctgtcgacacggtt                                                                                                                  >  5:279241‑M1/1‑112 (MQ=255)                                      cGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGa                                                                                                                >  5:110803/1‑149 (MQ=255)                                      cGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGa                                                                                                                <  4:159042/149‑1 (MQ=255)                                       gCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGCGACACGTGAACCGTGTCGACAGAAGGTTGAc                                                                                                               >  6:269587/1‑149 (MQ=255)                                        cAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAgg                                                                                                                    >  8:4583/1‑143 (MQ=255)                                        cAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAgg                                                                                                                    <  7:4583/143‑1 (MQ=255)                                         aGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGAccc                                                                                                             >  4:74987/1‑149 (MQ=255)                                           cTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCaa                                                                                                           <  8:151608/149‑1 (MQ=255)                                               tCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGcc                                                                                                       >  8:155626/1‑149 (MQ=255)                                                  ttGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGa                                                                                                                <  2:247845/137‑1 (MQ=255)                                                  ttGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGa                                                                                                                >  1:247845/1‑137 (MQ=255)                                                     tCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGc                                                                                                  <  6:110803/148‑1 (MQ=255)                                                     tCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCc                                                                                                 >  6:250466‑M2/1‑148 (MQ=255)                                                       ggTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCcag                                                                                               >  6:25544‑M2/1‑146 (MQ=255)                                                                gCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTATGTCTTTAGTACCGCTCATGGCAAAACTCCTGgcccaggcgttgggtcaaccttctgtcgacacggttcacgtgtctccatttgcaggagttttg                                                                                       <  6:279241‑M1/148‑64 (MQ=255)                                                                  cAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGgcccaggcgttgggtcaaccttctgtcgacacggttcacgtgtctccatttgcaggagttttgcc                                                                                     <  7:128497‑M1/148‑66 (MQ=255)                                                                  cAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCaa                                                                                                           >  2:285033/1‑126 (MQ=255)                                                                  cAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCaa                                                                                                           <  1:285033/126‑1 (MQ=255)                                                                   aaCACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGgcccaggcgttgggtcaaccttctgtcgacacggttcacgtgtctccatttgcag                                                                                               >  4:286299‑M1/1‑82 (MQ=255)                                                                   aaCACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGgcccaggcgttgggtcaaccttctgtcgacacggttcacgtgtctccatttgcag                                                                                               <  3:286299‑M1/137‑56 (MQ=255)                                                                    caccccTGTGTCACTTTGCCGATCGCTTCGTTGTCCAAGGATTTCGCTTTTTCGTTAGTACCTCTCATGGCAAAACTCCTGCAAATTGAGACACGTTAACAGTGTCGACAGAATGTTGAACCAACGCCTGGGCCAGGAGTTTCAACGGa                                                                                  <  6:37711/146‑1 (MQ=255)                                                                        ccTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCcaggagt                                                                                           <  8:149222‑M2/136‑8 (MQ=255)                                                                        ccTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCcaggagt                                                                                           >  7:149222‑M2/1‑129 (MQ=255)                                                                        ccTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTc                                                                              >  6:90216/1‑149 (MQ=255)                                                                            tttCACGTTTCCGATCGCTTCGTTGGCCAATCCTTTCGCTTTGGCTTTAGTACCGCGCCTGGCAAAACTCCTGCAAATTGAGACACGTGAACCGTGGCGACAGAAGGTTGACCCAACGCCTGGTCCAGGAGTTTCAACGGATTTCCCg                                                                           <  4:143381/148‑1 (MQ=255)                                                                                aCGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGc                                                                         >  4:310477/1‑146 (MQ=255)                                                                                aCGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGc                                                                         <  7:155626/146‑1 (MQ=255)                                                                                 cGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAg                                                                      >  1:181481/1‑148 (MQ=255)                                                                                       cGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGa                                                               <  7:2431/149‑1 (MQ=255)                                                                                          tCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACg                                                            <  3:74987/149‑1 (MQ=255)                                                                                             cTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGa                                                                                                                >  1:148760/1‑94 (MQ=255)                                                                                             cTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGa                                                                                                                <  2:148760/94‑1 (MQ=255)                                                                                             cTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTa                                                         <  6:94147/149‑1 (MQ=255)                                                                                              ttCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTa                                                         >  6:86504/1‑148 (MQ=255)                                                                                                 gTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTaaaa                                                      <  5:90216/148‑1 (MQ=255)                                                                                                 gTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTaaaa                                                      <  5:86504/148‑1 (MQ=255)                                                                                                  ttGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACg                                                    >  4:194151/1‑149 (MQ=255)                                                                                                     gCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACGGCa                                                 <  2:181481/149‑1 (MQ=255)                                                                                                     gCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACGGCa                                                 <  4:58997/149‑1 (MQ=255)                                                                                                      ccAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACGGCAg                                                >  6:372294/1‑149 (MQ=255)                                                                                                            cTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACGGCAGGCGaa                                           >  4:186525/1‑148 (MQ=255)                                                                                                             tttCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACTGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACGGCAGGCGAATa                                         >  2:340124/1‑149 (MQ=255)                                                                                                                   tttGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGcc                                                                        >  6:108789/1‑112 (MQ=255)                                                                                                                   tttGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGcc                                                                        <  5:108789/112‑1 (MQ=255)                                                                                                                            aGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACGGCAGGCGAATACCGCCCAAGCCcgc                           <  3:111206/148‑1 (MQ=255)                                                                                                                              tACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACgg                                                   >  4:192248/1‑122 (MQ=255)                                                                                                                              tACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACgg                                                   <  3:192248/122‑1 (MQ=255)                                                                                                                               aCCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACg                                                    <  1:134241/120‑1 (MQ=255)                                                                                                                               aCCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACg                                                    >  2:134241/1‑120 (MQ=255)                                                                                                                                ccGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACGGCAGGCGAATACCGcc                                    >  6:320034/1‑135 (MQ=255)                                                                                                                                ccGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACGGCAGGCGAATACCGCCCAAGCCCGCGaa                        >  4:272739/1‑147 (MQ=255)                                                                                                                                ccGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACGGCAGGCGAATACCGCCCAAGCCCGCGAaga                      <  5:269587/149‑1 (MQ=255)                                                                                                                                ccGCTCATGGCAAAACTCCTGCAAATGCAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACGGCAGGCGAATACCGcc                                    <  5:320034/135‑1 (MQ=255)                                                                                                                                   cTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACGGCAGGCGAATACCGCCCAAGCCCGCGAAGAGGc                   <  3:186525/149‑1 (MQ=255)                                                                                                                                    tCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACGGCAGGCGAATACCGCCCAAGCCCGCGaa                        <  4:149745/143‑1 (MQ=255)                                                                                                                                    tCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACGGCAGGCGAATACCGCCCAAGCCCGCGaa                        >  3:149745/1‑143 (MQ=255)                                                                                                                                        ggCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCcaggagttttgccatgagcggtactaaagacaaagcgaaaggcttggccaacgaagcgatcggcaacgtgaaacagggtgttg               <  7:128497‑M2/148‑84 (MQ=255)                                                                                                                                        ggCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACGGCAGGCGAATACCGCCCAAGCCCGCGAAGAGGCCg                 <  6:142189/146‑1 (MQ=255)                                                                                                                                        ggCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACGGCAGGCGAATACCGCCCAAGCCCGCGAAGAGGCCg                 >  5:142189/1‑146 (MQ=255)                                                                                                                                          cAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCcaggagttttgccatgagcggtactaaagacatagcgaaaggcttggccaacgaagcgatcggcaacgtgaaacagggtgttggc             <  6:279241‑M2/148‑86 (MQ=255)                                                                                                                                              aCTCCTGgcccaggcgttgggtcaaccttctgtcgacacggttcacgtgtctccatttgcaggagttttgccatgagcggtactaaagacaaagcgaaaggcttggccaacgaagcgatcggcaacgtgaaacagg                     <  8:149222‑M1/136‑130 (MQ=255)                                                                                                                                              aCTCCTGgcccaggcgttgggtcaaccttctgtcgacacggttcacgtgtctccatttgcaggagttttgccatgagcggtactaaagacaaagcgaaaggcttggccaacgaagcgatcggcaacgtgaaacagg                     >  7:149222‑M1/1‑7 (MQ=255)                                                                                                                                                  cTGgcccaggcgttgggtcaaccttctgtcgacacggttcacgtgtctccatttgcaggagttttgccatgagcggtactaaagacaaagcgaaaggcttggccaacgaagcgatcggcaacgtgaaacagggtgttggcaaggtgacc    >  6:25544‑M1/1‑3 (MQ=255)                                                                                                                                                  cTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCcaggagttttgccatgagcggtactaaagacaaagcgaaaggcttggccaacgaagcgatcggcaacgtgaaacagggtgtt                <  3:286299‑M2/137‑83 (MQ=255)                                                                                                                                                  cTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCcaggagttttgccatgagcggtactaaagacaaagcgaaaggcttggccaacgaagcgatcggcaacgtgaaacagggtgtt                >  4:286299‑M2/1‑55 (MQ=255)                                                                                                                                                  cTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACGGCAGGCGAATACCGCCCAAGCCCGCGAAGAGGCCGGCACTGGCAcc      <  5:372294/147‑1 (MQ=255)                                                                                                                                                    ggcccaggcgttgggtcaaccttctgtcgacacggttcacgtgtctccatttgcaggagttttgccatgagcggtactaaagacaaagcgaaaggcttggccaacgaagcgatcggcaacgtgaaacagggtgttggcaaggtgaccga  >  6:250466‑M1/1‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CGCCTCGCCTTTGAGCTCCTGCGCCTTGCCTTCGGCCCGCAGCTTTTCGTTGTCGGTCACCTTGCCAACACCCTGTTTCACGTTGCCGATCGCTTCGTTGGCCAAGCCTTTCGCTTTGTCTTTAGTACCGCTCATGGCAAAACTCCTGCAAATGGAGACACGTGAACCGTGTCGACAGAAGGTTGACCCAACGCCTGGGCCAGGAGTTTCAACGGATTTCCCGGCCAGAAGCCGAACGGTAAAACGGCAGGCGAATACCGCCCAAGCCCGCGAAGAGGCCGGCACTGGCACCGCAA  >  NC_002947/5182141‑5182436

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.