New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6032423	38 (0.650)	5 (0.090)	5/246	NT	11.5%	coding (1277/1590 nt)	dppA‑IV	dipeptide transport protein
	?	NC_002947	= 6032456	41 (0.730)					coding (1310/1590 nt)	dppA‑IV	dipeptide transport protein

CTCAACCCCAACCCCAGCCTTGGCGCGCAGATGCTGCAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTA  >  NC_002947/6032278‑6032571                                                                                                                                                  |                                                                                                                                                     cTCAACCCCAACCCCAGCCTTGGCGCGCAGATGCTGCAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCAtgggctggg                                                                                                                                                    <  6:121379/148‑1 (MQ=255)    aaccccaaccccAGCCTTGGCGCGCAGATGCTGCAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTgggcggg                                                                                                                                                >  7:260387/1‑149 (MQ=255)    aaccccaaccccAGCCTTGGCGCGCAGATGCTGCAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTgggcgg                                                                                                                                                 <  6:300893/148‑1 (MQ=255)     accccaaccccaGCCTTGGCGCGCAGTTGATGCAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGTGCTAGCTTTTCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTgggcgggc                                                                                                                                               <  6:367644/149‑1 (MQ=255)     accccaaccccaGCCTTGGCGCGCAGATGCTGCAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTgggcgggc                                                                                                                                               <  6:335447/149‑1 (MQ=255)     accccaaccccaGCCTTGGCGCGCAGATGCTGCAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTgggcgggc                                                                                                                                               <  8:260387/149‑1 (MQ=255)      ccccaaccccaGCCTTGGCGCGCAGATGCTGCAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTgggcgggc                                                                                                                                               >  3:87027/1‑148 (MQ=255)        ccaaccccaGCCTTGGCGCGCAGATGCTGCAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGa                                                                                                                                             >  5:176045/1‑148 (MQ=255)            ccccaGCCTTGGCGCGCAGATGCTGCAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTgggcgggc                                                                                                                                               >  8:88723/1‑142 (MQ=255)            ccccaGCCTTGGCGCGCAGATGCTGCAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTgggcgggc                                                                                                                                               <  7:88723/142‑1 (MQ=255)               caGCCTTGGCGCGCAGATGCTGCAAGTCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGaggaagttgtccgggtc                                                                                                                                     >  1:186605‑M1/1‑132 (MQ=255)               caGCCTTGGCGCGCAGATGCTGCAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGc                                                                                                                                      >  6:125868/1‑148 (MQ=255)                      ggCGCGCAGATGCTGCAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCg                                                                                                                                <  4:87027/147‑1 (MQ=255)                       gcgcgcAGATGCTGCAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGATAACGGCGACCCGGAc                                                                                                                             <  2:208822/149‑1 (MQ=255)                       gcgcgcAGATGCTGCAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGa                                                                                                                              <  1:228829/148‑1 (MQ=255)                         gcgcAGATGCTCCAAGCCGTCTTGGCGAATATTCGTATCAAGTCTGAAATCCGCGTGATCGATTGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACaa                                                                                                                           <  8:344276/149‑1 (MQ=39)                             aGATGCTGCAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTc                                                                                                                       <  5:348940/149‑1 (MQ=255)                               aTGCTGCAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCt                                                                                                                     <  6:176045/149‑1 (MQ=255)                               aTGCTGCAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTGGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTcc                                                                                                                      >  2:121230/1‑148 (MQ=255)                                tgctgcAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTc                                                                                                                    >  8:128676‑M2/1‑148 (MQ=255)                                  ctgcAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTca                                                                                                                   >  3:305353‑M2/1‑146 (MQ=255)                                   tgcAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTgggcgg                                                                                                                                                 <  7:311920/117‑1 (MQ=255)                                   tgcAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTgggcgg                                                                                                                                                 >  8:311920/1‑117 (MQ=255)                                     cAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGaggaagttgtccgggtcgccgttgtcgcccgcccagc                                                                                                                 <  1:330748‑M1/147‑38 (MQ=255)                                     cAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGCCAACGGCGACCCGGACAACTTCCTcagcc                                                                                                                >  1:26645‑M2/1‑143 (MQ=255)                                     cAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTcagccc                                                                                                               <  4:101320‑M2/149‑7 (MQ=255)                                       agtcgacTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGaggaagttgtccgggtcgccgttgtcgcccgcccagcccat                                                                                                             <  2:186605‑M1/146‑42 (MQ=255)                                        gCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCa                                                                                                            <  8:314221/149‑1 (MQ=255)                                                ggCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTc                                                                                                      <  1:154256/147‑1 (MQ=255)                                                 tcGAAGATTGGTATCAAGGCTGAAAGCCGCGTGCTCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCt                                                                                                    <  4:249789/147‑1 (MQ=255)                                                 gtgAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCAAGACTTGCTGTTCATGGGCTGGGCGGCCGACAACGCCCACCCGGACAACATCCTCAGCCCGCAGTTTTCCtg                                                                                                   >  7:169153/3‑149 (MQ=255)                                                 gCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGCGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCt                                                                                                    <  8:221146/148‑1 (MQ=255)                                                  tgattaTTGGTATCTAGGCTGTAATCTGCGTGTTCGAATGGGGCGTGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCtgt                                                                                                  <  8:169153/144‑1 (MQ=38)                                                           gTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTc                                                                                         >  1:299727/1‑149 (MQ=255)                                                           gTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTc                                                                                         <  3:101320/149‑1 (MQ=255)                                                                     tGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGAc                                                                                                                             >  1:368053/1‑103 (MQ=255)                                                                     tGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGAc                                                                                                                             <  2:368053/103‑1 (MQ=255)                                                                      gAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGaggaagttgtccgggtcgccgttgtcgcccgcccagccca                                                                                                              <  1:58139‑M1/117‑41 (MQ=255)                                                                      gAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGaggaagttgtccgggtcgccgttgtcgcccgcccagccca                                                                                                              >  2:58139‑M1/1‑77 (MQ=255)                                                                                 gATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCAc                                                                   <  1:121230/149‑1 (MQ=255)                                                                                   tCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGc                                                                 >  4:116360/1‑149 (MQ=255)                                                                                                   tATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGagacgg                                                    >  7:115932/1‑141 (MQ=255)                                                                                                    aTCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCt                                                >  5:69316/1‑149 (MQ=255)                                                                                                       cgccgcGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGa                                             >  5:4500/1‑149 (MQ=255)                                                                                                            cgcCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGc                                        <  5:125868/149‑1 (MQ=255)                                                                                                               cAAGGCCGGCGACCATGACTTGCTGTTCATGGGCTGGGCGGTCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGa                                     <  7:13985/149‑1 (MQ=255)                                                                                                               cAACGCCGGCTAGCATGACTTGCTGTTCATGGCCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCACTATTCCTGTGCGGCCGTAGAGTCAGCGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTg                                      >  3:180024/1‑148 (MQ=38)                                                                                                                aaGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGAt                                    >  1:371328/1‑149 (MQ=255)                                                                                                                               gACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGcac                     >  4:42138/1‑149 (MQ=255)                                                                                                                                    gCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCaccacc                 >  6:161488/1‑148 (MQ=255)                                                                                                                                    gCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCaccacc                 >  8:269402/1‑148 (MQ=255)                                                                                                                                           aTGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTcagcccatgaacagcaagtcatgctcgccggccttggcgcggcggataagctcgccccattcgatcacgcggatttcagccttgataccaatcttcgccaagtcgact         <  2:186605‑M2/149‑109 (MQ=255)                                                                                                                                            tgggctgggcGGGCGACAACGGCGACCCGGACAACTTCCTcagcccatgaacagcaagtcatgctcgccggccttggcgcggcggataagctcgccccattcgatcacgcggatttc                                        <  1:58139‑M2/117‑78 (MQ=255)                                                                                                                                            tgggctgggcGGGCGACAACGGCGACCCGGACAACTTCCTcagcccatgaacagcaagtcatgctcgccggccttggcgcggcggataagctcgccccattcgatcacgcggatttc                                        >  2:58139‑M2/1‑40 (MQ=255)                                                                                                                                             gggCTGaggaagttgtccgggtcgccgttgtcgcccgcccagcccatgaacagcaagtcatgctcgccggccttggcgcggcggataagctcgccccattcgatcacgcggatttcagccttgataccaatcttcgccaagtcggcttg       <  4:101320‑M1/149‑144 (MQ=255)                                                                                                                                              ggCTGaggaagttgtccgggtcgccgttggcgcccgcccagcccatgaacagcaagtcatgctcgccggccttggcgcggcggataagctcgccccattcgatcacgcggatttcagccttgataccaatcttcgccaagtcggcttg       >  1:26645‑M1/1‑5 (MQ=255)                                                                                                                                               gctgggcGGGCGACAACGGCGACCCGGACAACTTCCTcagcccatgaacagcaagtcatgctcgccggccttggcgcggcggataagctcgccccattcgatcacgcggatttcagccttgataccaatcttcgccaagtcggcttg       <  1:330748‑M2/147‑111 (MQ=255)                                                                                                                                                 tGaggaagttgtccgggtcgccgttgtcgcccgcccagcccatgaacagcaagtcatgctcgccggccttggcgcggcggataagctcgccccattcgatcacgcggatttcagccttgataccaatcttcgccaagtcggcttgcag    >  3:305353‑M1/1‑2 (MQ=255)                                                                                                                                                  gaggaagttgtccgggtcgccgttgtcgcccgcccagcccatgaacagcaagtcatgctcgccggccttggcgcggcggataagctcgccccattcgatcacgcggatttcagccttgataccaatcttcgccaagtcggcttgcagca  >  8:128676‑M1/1‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                     CTCAACCCCAACCCCAGCCTTGGCGCGCAGATGCTGCAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTA  >  NC_002947/6032278‑6032571

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.