New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6032423	38 (0.650)	5 (0.090)	5/246	NT	11.5%	coding (1277/1590 nt)	dppA‑IV	dipeptide transport protein
	?	NC_002947	= 6032456	41 (0.730)					coding (1310/1590 nt)	dppA‑IV	dipeptide transport protein

ATGCTGCAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGCCGGCTGTACCAGCAGGCGCAGA  >  NC_002947/6032308‑6032599                                                                                                                                                     |                                                                                                                                                aTGCTGCAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCt                                                                                                                                                 <  6:176045/149‑1 (MQ=255)  tgctgcAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTc                                                                                                                                                >  8:128676‑M2/1‑148 (MQ=255)    ctgcAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTca                                                                                                                                               >  3:305353‑M2/1‑146 (MQ=255)       cAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGCCAACGGCGACCCGGACAACTTCCTcagcc                                                                                                                                            >  1:26645‑M2/1‑143 (MQ=255)       cAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTcagccc                                                                                                                                           <  4:101320‑M2/149‑7 (MQ=255)          gCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCa                                                                                                                                        <  8:314221/149‑1 (MQ=255)                  ggCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTc                                                                                                                                  <  1:154256/147‑1 (MQ=255)                   tcGAAGATTGGTATCAAGGCTGAAAGCCGCGTGCTCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCt                                                                                                                                <  4:249789/147‑1 (MQ=255)                   gtgAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCAAGACTTGCTGTTCATGGGCTGGGCGGCCGACAACGCCCACCCGGACAACATCCTCAGCCCGCAGTTTTCCtg                                                                                                                               >  7:169153/3‑149 (MQ=255)                   gCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGCGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCt                                                                                                                                <  8:221146/148‑1 (MQ=255)                    tgattaTTGGTATCTAGGCTGTAATCTGCGTGTTCGAATGGGGCGTGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCtgt                                                                                                                              <  8:169153/144‑1 (MQ=38)                             gTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTc                                                                                                                     >  1:299727/1‑149 (MQ=255)                             gTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTc                                                                                                                     <  3:101320/149‑1 (MQ=255)                                                   gATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCAc                                                                                               <  1:121230/149‑1 (MQ=255)                                                     tCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGc                                                                                             >  4:116360/1‑149 (MQ=255)                                                                     tATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGagacgg                                                                                >  7:115932/1‑141 (MQ=255)                                                                      aTCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCt                                                                            >  5:69316/1‑149 (MQ=255)                                                                         cgccgcGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGa                                                                         >  5:4500/1‑149 (MQ=255)                                                                              cgcCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGc                                                                    <  5:125868/149‑1 (MQ=255)                                                                                 cAAGGCCGGCGACCATGACTTGCTGTTCATGGGCTGGGCGGTCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGa                                                                 <  7:13985/149‑1 (MQ=255)                                                                                 cAACGCCGGCTAGCATGACTTGCTGTTCATGGCCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCACTATTCCTGTGCGGCCGTAGAGTCAGCGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTg                                                                  >  3:180024/1‑148 (MQ=38)                                                                                  aaGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGAt                                                                >  1:371328/1‑149 (MQ=255)                                                                                                 gACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGcac                                                 >  4:42138/1‑149 (MQ=255)                                                                                                      gCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCaccacc                                             >  8:269402/1‑148 (MQ=255)                                                                                                      gCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCaccacc                                             >  6:161488/1‑148 (MQ=255)                                                                                                             aTGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTcagcccatgaacagcaagtcatgctcgccggccttggcgcggcggataagctcgccccattcgatcacgcggatttcagccttgataccaatcttcgccaagtcgact                                     <  2:186605‑M2/149‑109 (MQ=255)                                                                                                              tgggctgggcGGGCGACAACGGCGACCCGGACAACTTCCTcagcccatgaacagcaagtcatgctcgccggccttggcgcggcggataagctcgccccattcgatcacgcggatttc                                                                    <  1:58139‑M2/117‑78 (MQ=255)                                                                                                              tgggctgggcGGGCGACAACGGCGACCCGGACAACTTCCTcagcccatgaacagcaagtcatgctcgccggccttggcgcggcggataagctcgccccattcgatcacgcggatttc                                                                    >  2:58139‑M2/1‑40 (MQ=255)                                                                                                                 gctgggcGGGCGACAACGGCGACCCGGACAACTTCCTcagcccatgaacagcaagtcatgctcgccggccttggcgcggcggataagctcgccccattcgatcacgcggatttcagccttgataccaatcttcgccaagtcggcttg                                   <  1:330748‑M2/147‑111 (MQ=255)                                                                                                                     ggcgggcgACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTAc                             <  3:116360/149‑1 (MQ=255)                                                                                                                     ggcgggcgACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTAc                             <  2:371328/149‑1 (MQ=255)                                                                                                                        gggcgACAACGGCGACGCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCAGGCTTCTGCGACAGGCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCa                          <  4:180024/149‑1 (MQ=255)                                                                                                                           cgACAACGGCGACCCGGACAACTTACTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTATGCGACAGCAGCCTCGACAAGCTGAACACCCCCGGGCCCACCACCACCGCCGACACCGTACCCCGcc                       >  7:232175/1‑149 (MQ=255)                                                                                                                               aaCGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGCCGGCt                   <  5:161488/149‑1 (MQ=255)                                                                                                                                aCGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGCCGGCTg                  <  7:269402/149‑1 (MQ=255)                                                                                                                                  ggCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGCCgg                     >  8:319885/1‑144 (MQ=255)                                                                                                                                  ggCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGCCgg                     >  8:324830/1‑144 (MQ=255)                                                                                                                                  ggCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGCCgg                     <  7:319885/144‑1 (MQ=255)                                                                                                                                  ggCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGCCgg                     <  7:324830/144‑1 (MQ=255)                                                                                                                                   gCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGCCGGCTGTAc               >  6:280230/1‑149 (MQ=255)                                                                                                                                   gCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGCCGGCTGTAc               <  6:4500/149‑1 (MQ=255)                                                                                                                                   gCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGCCGGCTGTAc               <  2:299727/149‑1 (MQ=255)                                                                                                                                     gACCCGGACAACTTCCTcagcccatgaacagcaagtcatgctcgccggccttggcgcggcggataagctcgccccattcgatcacgcggatttcagccttgataccaatcttcgccaagtcgacttgcagcatctgcgcgccaaggctg             >  1:186605‑M2/1‑17 (MQ=255)                                                                                                                                     gACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGcc                       <  6:134366/139‑1 (MQ=255)                                                                                                                                     gACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGcc                       >  5:134366/1‑139 (MQ=255)                                                                                                                                     gACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGCCGGCTGTAc               >  8:187230/1‑147 (MQ=255)                                                                                                                                        ccGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGCCGGCTGTACcag            >  8:57625/1‑147 (MQ=255)                                                                                                                                          ggACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGCCGGCTGTACCAGCAgg        <  7:57625/149‑1 (MQ=255)                                                                                                                                          ggACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGCCGGCTGTACCAGCAgg        <  7:187230/149‑1 (MQ=255)                                                                                                                                              aaCATCCTCCCCCCGCTCTTTTCCTGTGGGGCGGTCGCGTCTCGTCCCCACTTCCCACGCTTCTGGCCCACCCGCCTCCACCTGCTGATCAGCGCCGGGCTCACCACCAACGACCATAGCGTACGCATCCGGCTGTACCAGCAGGCGCa    <  8:232175/149‑1 (MQ=255)                                                                                                                                                cTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGCCGGCTGTACCAGCAGGCGCAGa  >  8:187689/1‑149 (MQ=255)                                                                                                                                                cTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGCCGGCTGTACCAGCAGGCGCAGa  >  2:155766/1‑149 (MQ=255)                                                                                                                                                   ccTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCa                                     >  8:172365/1‑111 (MQ=255)                                                                                                                                                   ccTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCa                                     <  7:172365/111‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                ATGCTGCAAGCCGACTTGGCGAAGATTGGTATCAAGGCTGAAATCCGCGTGATCGAATGGGGCGAGCTTATCCGCCGCGCCAAGGCCGGCGAGCATGACTTGCTGTTCATGGGCTGGGCGGGCGACAACGGCGACCCGGACAACTTCCTCAGCCCGCAGTTTTCCTGTGCGGCGGTCGAGTCAGGGACCAACTTCGCACGCTTCTGCGACAGCCGCCTCGACCAGCTGATCAGCGCCGGGCGCACCACCAACGACCAGAGCGTACGCAGCCGGCTGTACCAGCAGGCGCAGA  >  NC_002947/6032308‑6032599

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.