New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 879400 | 54 (0.920) | 3 (0.050) | 3/246 | NT | 5.9% | coding (929/1683 nt) | PP_0763 | medium‑chain‑fatty acid CoA ligase |
? | NC_002947 | = 879456 | 44 (0.780) | coding (985/1683 nt) | PP_0763 | medium‑chain‑fatty acid CoA ligase |
CCACTGCGTGCCGACCATCCTGCAGATGCTGCTCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGATGAACTGCAGGCCGGCAGCGAGGATGAGCGCGTCACTTACCGTATCAAGGCCGGTGTGCCGGTGCCGTTGGTCGAAGCGGCCATCG > NC_002947/879311‑879600 | ccACTGCGTGCCGACCATCCTGCAGATGCTGCTCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGAcc > 8:217813‑M2/1‑146 (MQ=255) aCTGCGTGCCGACCATCCTGCAGATGCTGCTCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGAccgcc < 6:32841‑M2/149‑6 (MQ=255) aCTGCGTGCCGACCATCCTGCAGATGCTGCTCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGAccgcc < 7:315427‑M2/149‑6 (MQ=255) cTGCGTGCCGACCATCCTGCAGATGCTGCTCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGAccgccg < 5:135592‑M2/149‑7 (MQ=255) cGTGCCGACCATCCTGCAGATGCTGCTCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACcgccgc < 6:133206/147‑1 (MQ=255) cGTGCCGACCATCCTGCAGATGCTGCTCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCcgcg > 1:121697/1‑148 (MQ=255) gTGCCGACCATCCTGCAGATGCTGCTCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAAACGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTa > 4:368157/1‑149 (MQ=255) tGCCGACCATCCTGCAGATGCTGCTCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTAt < 7:170993/149‑1 (MQ=255) tGCCGACCATCCTGCAGATGCTGCTCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTAt < 8:308546/149‑1 (MQ=255) gCCGACCATCCTGCAGATGCTGCTCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATg > 5:237938/1‑149 (MQ=255) ccGACCATCCTGCAGATGCTGCTCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCTCCCTGGCTCGCGGCATCCAGCTGACCTCCGCGTAttg > 4:40900/1‑147 (MQ=255) cGACCATCCTGCAGATGCTGCTCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGc < 2:312349/149‑1 (MQ=255) cGACCATCCTGCAGATGCTGCTCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGc < 6:135592/149‑1 (MQ=255) tGCAGATGCTGCTCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCATGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGa > 3:79237/1‑148 (MQ=255) gCAGATGCTGCTCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGaaa > 1:319795/1‑149 (MQ=255) ctgATGCTGCTCTACTGACAGAACGGCGATGGGCAGGAGTTCGGCGGCTGGAAGATCATCATCTGCGGCTGCTCGCTGAACCGTTCGCTTTACCAGGCCGCCCTGGCTCGCTGCATCCAGCTGACCGGCGCGTATTGCATGTCGGAAAc < 4:79237/147‑1 (MQ=255) cAGATGCTGCTCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAAc > 2:281085/1‑149 (MQ=255) gATGCTGCTCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCt < 2:319795/149‑1 (MQ=255) aTGCTGCTCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTg > 6:40877/1‑149 (MQ=255) tgctgcTCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGc < 3:368157/149‑1 (MQ=255) tgctgcTCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGc < 5:278878/149‑1 (MQ=255) gctCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCg > 6:49931/1‑136 (MQ=255) gctCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCg < 5:49931/136‑1 (MQ=255) ctCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGc < 6:278648/148‑1 (MQ=255) aaCTTCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTg < 3:40900/147‑1 (MQ=255) aaCTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGAt > 2:158870/1‑149 (MQ=255) gAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGa > 4:303693/1‑126 (MQ=255) gAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGa < 3:303693/126‑1 (MQ=255) ccgaGGGGCAGGACTTCGGCTGCTGTAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGGCGCCCTGGCGCGCGGCATCCAGCTGACAGCCGCGTATGGCATGTCGTAAACCTGCCCGCTGATCTCCGCTGCacac < 8:198592/146‑1 (MQ=255) cccAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCacac > 1:167152/1‑149 (MQ=255) aGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTg < 5:32841/149‑1 (MQ=255) ggggCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCCGATCTCCGCGGcaca < 4:110302/144‑1 (MQ=255) ggggCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCCGATCTCCGCGGcaca > 3:110302/1‑144 (MQ=255) gCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACg < 5:40877/149‑1 (MQ=255) aGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGAt < 8:315427/149‑1 (MQ=255) gtcgtCGGCGGCTGGTAGTTCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGATGa < 4:286510/145‑1 (MQ=255) ttCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGATGAACt > 5:104767/1‑149 (MQ=255) cggcggCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGATGAACt < 5:146655/147‑1 (MQ=255) ggcggcTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGATGAACTGc < 4:117363/148‑1 (MQ=255) ggcggcTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGATGAACTGCa < 6:237938/149‑1 (MQ=255) cggcTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGATGAACTGCAgg < 1:158870/149‑1 (MQ=255) ggcTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGATGAACTGCAGGc < 2:121697/149‑1 (MQ=255) ggAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGATGAACTGCAGGCCgg > 4:13657/1‑148 (MQ=255) atcatcGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGAccgccgatgatgatcttccagccgccgaagtcctgcccctgggcgttcgggcagttgagcagcatctgcaggatggtcggc < 4:33011‑M2/148‑82 (MQ=255) atcatcGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGAccgccgatgatgatcttccagccgccgaagtcctgcccctgggcgttcgggcagttgagcagcatctgcaggatggtcggc > 3:33011‑M2/1‑67 (MQ=255) tcatcGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGAccgccgatgatgatcttccagccgccgaagtcctgcccctgggcgttcgggcagttgagcagcatctgcaggatggtcggcac < 1:192320‑M2/149‑84 (MQ=255) aaCCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGATGAACTGCAGGCCGGCAGCGAGGATGAGCGCGTCACTTACCGt < 1:281085/147‑1 (MQ=255) aaCCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGATGAACTGCAGGCCGGCAGCGAGGATGAGCGCGTCACTTACCGTAt > 3:217640/1‑149 (MQ=255) gTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCCGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGATGAACTGCAGGCCGGCAGCGAGGATGAGCGCGTCACTTACCGTATCAAg > 1:237200/1‑149 (MQ=255) gTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATACAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGATGAACTGCAGGCCGGCAGCGAGGATGAgc > 5:75499/1‑129 (MQ=255) tACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGATGAACTGCAGGCCGGCAGCGAGGATGAGCGCGTCACTTACCGTATCAAGGCCGgt < 6:104767/147‑1 (MQ=255) cAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGATGAACTGCAGGCCGGCAGCGAGGATGAGCGCGTCACTTACCGTATCAAGGCCg < 3:88328/142‑1 (MQ=255) cAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGATGAACTGCAGGCCGGCAGCGAGGATGAGCGCGTCACTTACCGTATCAAGGCCg > 4:88328/1‑142 (MQ=255) cAGGCCGCCATCGCGCGCGGCATCCAGCTGACCGCCGCGAAAGGCATGACGCAAACCTGCCCGCTGATCTCCGCCGCACACAAGAACGATCAACTGCACGCCCGCAGCGAGGATGAGAGCGTAACTTACCGTATAAAGGACGGTgtccc > 8:175752/1‑149 (MQ=255) gcgcgcGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGATGAACTGCAGGCCGGCAGCGAGGATGAGCGCGTCACTTACCGTATCAAGGCCGGTGTGCCGGTGCCGTTgg < 3:13657/148‑1 (MQ=255) gagcgcgTCATCCAGATGAACGCCTAGTATGGAATGTCGGAAACCTGCCCGATGATCTCCGCGGCACACCTGAACGATGAACTGCAGGCCGGCAGCGAGGATGAGCGCGTCACTTACCGTATCAAGGCCGGTGTGCCGGTGCCGTTGGt > 6:152921/3‑149 (MQ=255) cATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGATGAACTGCAGGCCGGCAGCGAGGATGAGCGCGTCACTTACCGTATCAAGGCCGGTGTGCCGGTGCCGTTGGTCGAAGCgg > 5:148156/1‑149 (MQ=255) gCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGATGAACTGCAGGCCGGCAGCGAGGATGAGCGCGTCACTTACCGTATCAAGGCCGGTGTGCCGGTGCCGTTGGTCGAAGCGGCCAtcg < 6:148156/149‑1 (MQ=255) tGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGATGAACTGCAGGCCGGCAGCGAGGATGAGCGCGTCACTTAcc > 1:271507/1‑102 (MQ=255) tGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGATGAACTGCAGGCCGGCAGCGAGGATGAGCGCGTCACTTAcc < 2:271507/102‑1 (MQ=255) | CCACTGCGTGCCGACCATCCTGCAGATGCTGCTCAACTGCCCGAACGCCCAGGGGCAGGACTTCGGCGGCTGGAAGATCATCATCGGCGGCAGCTCGCTCAACCGTTCGCTGTACCAGGCCGCCCTGGCGCGCGGCATCCAGCTGACCGCCGCGTATGGCATGTCGGAAACCTGCCCGCTGATCTCCGCGGCACACCTGAACGATGAACTGCAGGCCGGCAGCGAGGATGAGCGCGTCACTTACCGTATCAAGGCCGGTGTGCCGGTGCCGTTGGTCGAAGCGGCCATCG > NC_002947/879311‑879600 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |