New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	918900 =	60 (1.020)	5 (0.090)	3/246	NT	8.3%	coding (200/1335 nt)	opdC	histidine‑specific outer membrane porin D
	?	NC_002947	918958 =	53 (0.940)					coding (142/1335 nt)	opdC	histidine‑specific outer membrane porin D

CACCGCCGTCGAGCTTCAGGCCCAGCATGGCATGAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCAGCCT‑TGTCTTCATCTGCCTGGGCGGCGAAAGGGATCGTTGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTAC  >  NC_002947/918811‑919105                                                                                                                                                    |                                                                                                                                                       cACCGCCGTCGAGCTTCAGGCCCAGCATGGCAAGAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTAGAGGATGTCGCGGtt                                                                                                                                                        >  6:347818/1‑148 (MQ=255)    tcgccgcccaggcagatgaagacaaggctgatggcttcatcgaaggttcgtccttcaacctgcattttcgtaatgcctcttcttcaACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGaa                                                                                                                                                     >  1:114918‑M1/87‑148 (MQ=255)         tCGAGCTTCAGGCCCAGCATGGCATGAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGc                                                                                                                                             <  2:209248/149‑1 (MQ=255)           gAGCTTCAGGCCCAGCATGGCATGAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCAt                                                                                                                                           >  3:349522/1‑149 (MQ=255)            aGCTTCAGGCCCAGCATGGCATGAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCAtt                                                                                                                                          <  1:228080/149‑1 (MQ=255)             gCTTCAGGCCCAGCATGGCATGAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAATCGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCAttt                                                                                                                                         <  5:347818/149‑2 (MQ=255)             gCTTCAGGCCCAGCATGGCATGAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTa                                                                                                                                         <  6:254534/149‑1 (MQ=255)                 cAGGCCCAGCATGGCATGAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGa                                                                                                                                      >  8:98664/1‑148 (MQ=255)                  aGGCCCAGCATGGCATGAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTATCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGaa                                                                                                                                     >  1:97230/1‑148 (MQ=255)                    gCCCAGCATGGCATGAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAAt                                                                                                                                  <  6:374234/149‑1 (MQ=255)                    gCCCAGCATGGCATGAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAAt                                                                                                                                  >  4:251134/1‑149 (MQ=255)                      ccAGCATGGCATGAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATg                                                                                                                                 >  1:176706/1‑148 (MQ=255)                      ccAGCATGGCATGAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATg                                                                                                                                 >  4:319440/1‑148 (MQ=255)                      ccAGCATGGCATGAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGc                                                                                                                                <  7:89671/149‑1 (MQ=255)                       cAGCATGGCATGAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATg                                                                                                                                 >  7:230087/1‑147 (MQ=255)                         gcatggcatgAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGGTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAgg                                                                                                                             <  5:359997/149‑1 (MQ=255)                          catggcatgAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑Ta                                                                                                                                                >  8:270161/1‑129 (MQ=255)                          catggcatgAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGt                                                                                                                            <  3:371197/149‑1 (MQ=255)                              gcatgAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCATGTTg                                                                                                                          >  6:380157/1‑147 (MQ=255)                              gcatgAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGaa                                                                                                                        <  7:266332/149‑1 (MQ=255)                              gcatgAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGaa                                                                                                                        <  3:251134/149‑1 (MQ=255)                               catgAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAg                                                                                                                       <  6:311195/149‑1 (MQ=255)                                atgAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAgg                                                                                                                      <  2:176706/149‑1 (MQ=255)                                         cAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCtt                                                                                                             <  1:104734/149‑1 (MQ=255)                                          aGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTc                                                                                                            <  2:57063/149‑1 (MQ=255)                                            gCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGa                                                                                                          <  7:335994/149‑1 (MQ=255)                                              cAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGAt                                                                                                         >  2:107039/1‑148 (MQ=255)                                                  aCCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGc                                                                                                    <  2:232832/149‑1 (MQ=255)                                                  aCCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGc                                                                                                    >  1:11446/1‑149 (MQ=255)                                                    cGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCa                                                                                                  >  1:43113/1‑149 (MQ=255)                                                       ccACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCa                                                                                               <  2:97230/149‑1 (MQ=255)                                                        cacaCCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCAg                                                                                              >  1:160446/1‑149 (MQ=255)                                                          cacCCGGGGTGTAGAACGACTCGAAACCCGAAACAGAACAAACAACCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGACGCCATCAGcc                                                                                            >  2:25762/1‑149 (MQ=255)                                                           acCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCAGCCt                                                                                           >  2:341906/1‑149 (MQ=255)                                                                  gtgtAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGa                                                                                                          <  8:32919/127‑1 (MQ=255)                                                                  gtgtAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGa                                                                                                          >  7:32919/1‑127 (MQ=255)                                                                       gCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCAGCCT‑TGTCTTCATCt                                                                               <  1:221912/148‑1 (MQ=255)                                                                         ccGACTCGAAACGCGCTACCGCGCCCTGGCCCCCCTCGCGGGGGTCGCGCCCGCCGGCGTGGTGGTTGTCGCGGTTGAAG‑‑GAGTCATTACGAAAATGCAGGTTGAAGGCCGACCCTTCGATGAAGCCATCATCCT‑TGTCTTCATCTTcc                                                                            >  8:44995/1‑149 (MQ=255)                                                                          cGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCAAGCCGGCTTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACCAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCAGCAT‑TGTATTCATCTGCCt                                                                           >  2:292447/1‑149 (MQ=255)                                                                                      ttcaaccgcgacaaccacaacgccggcgtgcgcgacacccgcgagtggggccagggcgcggtTGAAGAAGAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCAGCCT‑TGTCTTCATCTGCCTGGGCGGCGa                                                                  >  1:114918‑M2/63‑148 (MQ=255)                                                                                      cgcTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCAGCCT‑TGTCTTCATCTGCCTGGGCGGCGAAAg                                                               <  6:205765/149‑1 (MQ=255)                                                                                          accgcgacaaccacaacgccggcgtgcgcgacacccgcgagtggggccagggcgcggtTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGcc                                                                                                   >  1:233015‑M2/59‑110 (MQ=255)                                                                                          accgcgacaaccacaacgccggcgtgcgcgacacccgcgagtggggccagggcgcggtTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGcc                                                                                                   <  2:233015‑M2/52‑1 (MQ=255)                                                                                          accgcgacaaccacaacgccggcgtgcgcgacacccgcgagtggggccagggcgcggtTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGcc                                                                                                   >  1:238198‑M2/59‑110 (MQ=255)                                                                                          accgcgacaaccacaacgccggcgtgcgcgacacccgcgagtggggccagggcgcggtTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGcc                                                                                                   <  2:238198‑M2/52‑1 (MQ=255)                                                                                                 ccTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACTAACCTTCGATGAAGCCATCAGCCT‑TGTCTTCATCTGCCTGGGCGGCGAAAGGGATCGTTGCa                                                    <  1:107039/149‑1 (MQ=255)                                                                                                 ccTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCAGCCT‑TGTCTTCATCTGCCTGGGCGGCGAAAGGGATCGTTGCa                                                    <  8:230087/149‑1 (MQ=255)                                                                                                       cccACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCAGCCT‑TGTCTTCATCTGCCTGGGCGGCGAAAGGGATCGTTGCAGTCAAc                                              >  7:243317/1‑149 (MQ=255)                                                                                                        ccACTCGCGGGTGTCGCGCACGCCGGCGATGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCAGCCT‑TGTCTTCATCTGCCTGGGCGGCGAAAGGGATCGTTGCAGTCAACg                                             >  1:210930/1‑149 (MQ=255)                                                                                                         cACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTc                                                                                                            >  7:1266/1‑86 (MQ=255)                                                                                                         cACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTc                                                                                                            <  8:1266/86‑1 (MQ=255)                                                                                                            tCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCAGCCT‑TGTCTTCATCTGCCTGGGCGGCGAAAGGGATCGTTGCAGTCAACGCAAt                                         >  4:89178/1‑149 (MQ=255)                                                                                                                 ggTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCAGCCT‑TGTCTTCATCTGCCTGGGCGGCGAAAGGGATCGTTGCAGTCAACGCAATGaaaa                                    <  1:341906/149‑1 (MQ=255)                                                                                                                   tgtCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCAGCCT‑TGTCTTCATCTGCCTGGGCGGCGAAAGGGATCGTTGCAGTCAACGCAATGAAAAGc                                  >  1:12299/1‑149 (MQ=255)                                                                                                                     tCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTGGAAGGACGAACCTTCGATGAAGCCATCAGCCT‑TGTCTTCATCTGCCTGGGCGGCGAAAGGGAGCGTTGCAGTCAATGCAATGAAAAGCgg                                <  4:349522/149‑1 (MQ=255)                                                                                                                       gcgcACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCAGCCTCCGTCTTCATCTGCCTGGGCGGCGAAAGGGATCGTTGCAGTCAACGCAATGAAAAGCggg                               <  1:106425/149‑1 (MQ=255)                                                                                                                       gcgcACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCAGCCT‑TGTCTTCATCTGCCTGGGCGGCGAAAGGGATCGTTGCAGTCAACGCAATGAAAAGCggg                               <  2:11446/148‑1 (MQ=255)                                                                                                                        cgcACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCtt                                                                                                             <  1:365904/70‑1 (MQ=255)                                                                                                                        cgcACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCtt                                                                                                             >  2:365904/1‑70 (MQ=255)                                                                                                                           aCGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCAGCCT‑TGTCTTCATCTGCCTGGGCGGCGAAAGGGATCGTTGCAGTCAACGCAATGAAAAGCGGGGTaaa                          <  3:319440/149‑1 (MQ=255)                                                                                                                                         gTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCAGCCT‑TGTCTTCATCTGCCTGGGCGGCGAAAGGGATCGTTGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGaa             <  2:160446/148‑1 (MQ=255)                                                                                                                                         gTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCAGCCT‑TGTCTTCATCTGCCTGGGCGGCGAAAGGGATCGTTGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGaa             <  2:43113/148‑1 (MQ=255)                                                                                                                                           tGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCAGCCT‑TGTCTTCATCTGCCTGGGCGGCGAAAGGGATCGTTGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAgg           >  8:281987/1‑148 (MQ=255)                                                                                                                                             tCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCAGCCT‑TGTCTTCATCTGCCTGGGCGGCGAAAGGGATCGTTGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCAc        <  5:380157/149‑1 (MQ=255)                                                                                                                                                cgttTGAAG‑‑TAGGCATTACTAAAAGGCATGTTGAAGTACGAACCTTCTATGAAGCCATCAGCCT‑TGTCTTCATCTGCCTGGGCGGCGAAAGGGATCGTTGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCgg     <  7:44995‑M2/145‑1 (MQ=255)                                                                                                                                                   tTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCAGCCT‑TGTCTTCATCTGCCTGGGCGGCGAAAGGGATCGTTGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTAc  <  7:98664‑M2/148‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                       CACCGCCGTCGAGCTTCAGGCCCAGCATGGCATGAGCATCCAGGCCAAAACCGACCACACCCGGGGTGTAGCCCGACTCGAAACGCGCTACCGCGCCCTGGCCCCACTCGCGGGTGTCGCGCACGCCGGCGTTGTGGTTGTCGCGGTTGAAG‑‑TAGGCATTACGAAAATGCAGGTTGAAGGACGAACCTTCGATGAAGCCATCAGCCT‑TGTCTTCATCTGCCTGGGCGGCGAAAGGGATCGTTGCAGTCAACGCAATGAAAAGCGGGGTAAAACGAAACGCGGAAGGCACCGGTAC  >  NC_002947/918811‑919105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.