New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1900862 =	44 (0.750)	4 (0.070)	4/252	NT	8.9%	coding (1413/4026 nt)	PP_1703	assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	1900910 =	39 (0.680)					coding (1461/4026 nt)	PP_1703	assimilatory nitrate reductase/sulfite reductase

CGCCGACATCCTGCTGCCGGCCGCGCTGTGGGCCGAAGGCGAGGGTGTGATGATCAACAGCGAGCGCAACCTGACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCTTCCACAACCCCTCAACCGGTTATGACCTGCGCGGTATCGGCTATGCCGAATTGCGGACACAGCCGCGCCAGTGGCCT  >  NC_002947/1900766‑1901057                                                                                                                                                 |                                                                                                                                                    cGCCGACATCCTGCTGCCGGCCGCGCTGTGGGCCGAAGGCGAGGGTGTGATGATCAACAGCGAGCGCAACCTGACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCgtgt                                                                                                                                                  <  6:97255/148‑1 (MQ=255) cGCCGACATCCTGCTGCCGGCCGCGCTGTGGGCCGAAGGCGAGGGTGTGATGATCAACAGCGAGCGCAACCTGACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGtgtg                                                                                                                                                 >  3:209771/1‑149 (MQ=255)  gCCGACATCCTGCTGCCGGCCGCGCTGTGGGCCGAAGGCGAGGGTGTGATGATCAACAGCGAGCGCAACCTGACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGc                                                                                                                                                <  3:201066/149‑1 (MQ=255)       cATCCTGCTGCCGGCCGCGCTGTGGGCCGAAGGCGAGGGTGTGATGATCAACAGCGAGCGCAACCTGACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATgg                                                                                                                                           <  3:164283/149‑1 (MQ=255)        aTCCTGCTGCCGGCCGCGCTGTGGGCCGAAGGCGAGGGTGTGATGATCAACAGCGAGCGCAACCTGACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGGCTGGCAGATCATTGCCCGCGTGGCGTGTGCCATggg                                                                                                                                          <  7:286412/149‑1 (MQ=255)            tgctgcCGGCCGCGCTGTGGGCTGAAGGCGAGGGTGTGATGATCAACAGCGAGCGCAACCTGACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTAt                                                                                                                                      >  1:332998/1‑149 (MQ=255)                 ccggccgCGCTGTGGGCCGAAGGCGAGGGTGTGATGATCAACAGCGAGCGCAACCTGACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGa                                                                                                                                 <  5:320854/149‑1 (MQ=255)                          cTGTGGGCCGAAGGCGAGGGTGTGATGATCAACAGCGAGCGCAACCTGACCCTGATGCCACGCGCTGTCGAGCCCCCCGCGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGa                                                                                                                        <  5:198826/149‑1 (MQ=255)                             tgGGCCGAAGGCGAGGGTGTGATGATCAACAGCGAGCGCAACCTGACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTa                                                                                                                     <  4:290511/149‑1 (MQ=255)                                gCCGAAGGCGAGGGTGTGATGATCAACAGCGAGCGCAACCTGACCCTGATGCCACGCGCTGTCGAGCCCCCCAAACAAAGCTTGCCGGAAAGGCAGATAATTGCCCCCCTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTAccc                                                                                                                  >  1:301302/1‑149 (MQ=255)                                  cGAAGGCGAGGGTGTGATGATCAACAGCGAGCGCAACCTGACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTAcccc                                                                                                                 >  4:16543/1‑148 (MQ=255)                                   gAAGGCGAGGGTGTGATGATCAACAGCGAGCGCAACCTGACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCaa                                                                                                               >  2:23866/1‑149 (MQ=255)                                    aaGGCGAGGGTGTGATGATCAACATCGAGCGCAACCTGACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAAt                                                                                                              <  4:70301/149‑1 (MQ=255)                                    aaGGCGAGGGTGTGATGATCAACAGCGAGCGCAACCTGACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAAt                                                                                                              >  8:36614/1‑149 (MQ=255)                                          aGGGTGTGATGATCAACAGCGAGCGCAACCTGACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGACAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGaa                                                                                                        <  3:171012/149‑1 (MQ=255)                                           gggTGTGATGATCAACAGCGAGCGCAACCTGACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTTCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGaa                                                                                                        <  4:209771/148‑1 (MQ=255)                                                tgatgaTCAACAGCGAGCGCAACCTGACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGgt                                                                                                   <  4:267464/148‑1 (MQ=255)                                                       cAACAGCGAGCGCAACCTGACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAg                                                                                            >  8:281698/1‑148 (MQ=255)                                                                        tGACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAg                                                                                                       <  5:208191/120‑1 (MQ=255)                                                                        tGACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAg                                                                                                       >  6:208191/1‑120 (MQ=255)                                                                         gACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGc                                                                                                                                    >  2:93905/1‑90 (MQ=255)                                                                         gACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGaa                                                                                                        <  5:311053/118‑1 (MQ=255)                                                                         gACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGaa                                                                                                        >  6:311053/1‑118 (MQ=255)                                                                         gACCCTGATGCCACGCGCTGTCGAGCCACCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCTTCcac                                                                          >  5:114761/1‑148 (MQ=255)                                                                            ccTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCTTCCACAAcc                                                                      >  1:281792/1‑149 (MQ=255)                                                                                  gCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCt                                                                               >  4:61781/1‑134 (MQ=255)                                                                                  gCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCt                                                                               <  3:61781/134‑1 (MQ=255)                                                                                              cGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCTTCCACAACCCCTCAACCGGTTATGAc                                                     <  5:210456/148‑1 (MQ=255)                                                                                                  ccacgcgggcaatgatctgccagtccggcaagctttgcccggggggcGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGATATACGCCGCTTCcac                                                                          >  5:296410‑M2/48‑123 (MQ=255)                                                                                                  ccacgcgggcaatgatctgccagtccggcaagctttgcccggggggcGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCTTCcac                                                                          <  6:296410‑M2/76‑1 (MQ=255)                                                                                                   cacgcgggcaatgatctgccagtccggcaagctttgcccggggggcGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAACCGGTGTATGAGGAAATACGCCGCTTCCACAACCCCTCAACCGGTTATGACCTgcgc                                               >  6:378087‑M2/47‑149 (MQ=255)                                                                                                     cccGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCTTCCACAACCCCTCAACCGGTTATGACCTGCGCgg                                             >  1:185456/1‑149 (MQ=255)                                                                                                         gtcAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCTTCCACAACCCCTCAACCGGTTATGACCTGCGCGGTATc                                         <  7:281698/147‑1 (MQ=255)                                                                                                         ggcaatgatctgccagtccggcaagctttgcccgcgtggcGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCTTCCACAACCCCTCCACCGGTTATGACCTGCGCGGTATc                                         >  7:239614‑M2/41‑149 (MQ=255)                                                                                                          gCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCTTCCACAACCCCTCAACCGGTTATGACCTGCGCGGTATCg                                        <  7:36614/149‑1 (MQ=255)                                                                                                               gCTTGCCGGACTTGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCTTCCACAACCCCTCAACCGGTTATGACCTGCGCGGTATCGGCTAt                                   <  6:200407/149‑1 (MQ=255)                                                                                                               gCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCTTCCACAACCCCTCAACCGGTTATGACCTGCGCGGTATCGGCTAt                                   >  1:267068/1‑149 (MQ=255)                                                                                                                    ccGGACT‑GCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCTTCCACAACCCCTCAACCGGTTATGACCTGCGCGGTATCGGCTATGCCGaa                             >  2:97629/1‑149 (MQ=255)                                                                                                                          tGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGaaa                                                                                        >  5:4475/1‑85 (MQ=255)                                                                                                                          tGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGaaa                                                                                        <  6:4475/85‑1 (MQ=255)                                                                                                                            gCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTTTGCCGACGCCTTCGACTACCCCAATGCCGAAGCGTTGTATGTGGAAATACGCCGCTTCCACAACCCCTCAACCGGTTATGACCTGCGCGGTATCGGCTATGCCGAATTGCg                        <  2:332998/147‑1 (MQ=255)                                                                                                                            gCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCTTCCACAACCCCTCACCCGGTTATGACCTGCGCGGTATCGGCTATGCCGAATTGCGGa                      <  2:301302/149‑1 (MQ=255)                                                                                                                               gATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCTTCCACAACCCCTCAACCGGTTATGAc                                                     <  8:179401/115‑1 (MQ=255)                                                                                                                                       cccGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCTTCCACAACCCCTCAACCGGTTATGACCTGCGCGGTATCGGCTATGCCGAATTGCGGACACAGCCgcgc           >  6:235957/1‑149 (MQ=255)                                                                                                                                       cccGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCTTCCACAACCCCTCAACCGGTTATGACCTGCGCGGTATCGGCTATGCCGAATTGCGGACACAGCAgcgc           <  3:16543/149‑1 (MQ=255)                                                                                                                                         cgcgTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCTTCCACAACCCCTCAACCGGTTATGACCTGCGCGGTATCGGCTATGCCGAATTGCGGACACAGCCGCGCCa         <  1:97629/149‑1 (MQ=255)                                                                                                                                          gcgtggcgtgTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCTTCCACAACCCCTCAACCGGTTATGACCTGCGCGGTATCGGCTATGCCGAATTGCGGACACAGCCGCGCCAg        <  2:281792/149‑1 (MQ=255)                                                                                                                                             tggcgtgTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCTTCCACAACCCCTCAACCGGTTATGACCTGCGCGGTATCGGCTATGCCGAATTGCGGACACAGCCGCGCCAGTgg     <  6:114761/149‑1 (MQ=255)                                                                                                                                               gcGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCTTCCACAACCCCTCAACCGGTTATGACCTGCGCGGTATCGGCTATGCCGAATTGCGGACACAGCCGCGCCAGTGGcc   <  2:185456‑M2/147‑1 (MQ=255)                                                                                                                                                cGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCTTCCACAACCCCTCCACCGGTTATGACCTGCGCGGTATCGGCTATGCCGAATTGCGGACACAGCCGCGCCAGTGGCCt  <  8:239614‑M2/148‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                    CGCCGACATCCTGCTGCCGGCCGCGCTGTGGGCCGAAGGCGAGGGTGTGATGATCAACAGCGAGCGCAACCTGACCCTGATGCCACGCGCTGTCGAGCCCCCCGGGCAAAGCTTGCCGGACTGGCAGATCATTGCCCGCGTGGCGTGTGCCATGGGCTATGCCGACGCCTTCGACTACCCCAATGCCGAAGCGGTGTATGAGGAAATACGCCGCTTCCACAACCCCTCAACCGGTTATGACCTGCGCGGTATCGGCTATGCCGAATTGCGGACACAGCCGCGCCAGTGGCCT  >  NC_002947/1900766‑1901057

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.