New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2476810 =108 (1.840)10 (0.180) 5/244 NT 9.1% coding (345/699 nt) PP_2170 chorismate mutase family protein
?NC_002947 2476835 = 97 (1.740)coding (370/699 nt) PP_2170 chorismate mutase family protein

Only 100 of 138 total aligned reads displayed.

CCTGCGTGTATCAAGGGTTTCAGGTCATCGTGACGGGCACTCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGAAGGCTCGTGACGCAAGCAGCGGGCTTCAAGAAAACCA  >  NC_002947/2476687‑2476982
                                                                                                                                                    |                                                                                                                                                     
cgtcacgagccttccacgtttggcgagaagcgaaacgaggctgcggtcgatttcatcgatccgttgacggacttcgtccagagaggtgcaaggtacatccatttgcatgacttccttttcatgAGCCTGCTCCAATCAATCGCAGGCTc                                                                                                                                                       >  6:131709‑M1/124‑149 (MQ=255)
 cTGCGTGTATCAAGGGTTTCAGGTCATCGTGACGGGCACTCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTc                                                                                                                                                       <  4:212241/148‑1 (MQ=255)
  tcacgagccttccacgtttggcgagaagcgaaacgaggctgcggtcgatttcatcgatccgttgacggacttcgtccagagaggtgcaaggtacatccatttgcatgacttccttttcatgAGCCTGCTCCAATCAATCGCAGGCTCAt                                                                                                                                                     >  2:1110‑M1/122‑149 (MQ=255)
  tcacgagccttccacgtttggcgagaagcgaaacgaggctgcggtcgatttcatcgatccgttgacggacttcgtccagagaggtgcaaggtacatccatttgcatgacttccttttcatgAGCCTGCTCCAATCAATCGCAGGCTCAt                                                                                                                                                     >  1:322240‑M1/122‑149 (MQ=255)
  tGCGTGTATCAAGGGTTTCAGGTCATCGTGACGGGCACTCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCAt                                                                                                                                                     >  3:294943/1‑149 (MQ=255)
   gCGTGTATCAAGGGTTTCAGGTCATCGTGACGGGCACTCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCAt                                                                                                                                                     >  3:183378/1‑148 (MQ=255)
    acgagccttccacgtttggcgagaagcgaaacgaggctgcggtcgatttcatcgatccgttgacggacttcgtccagagaggtgcaaggtacatccatttgcatgacttccttttcatgAGCCTGCTCCAATCAATCGCAGGCTCATg                                                                                                                                                    >  3:115277‑M1/120‑148 (MQ=255)
     gtgtATCAAGGGTTTCAGGTCATCGTGACGGGCACTCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGATCCAATCAATCGCAGGCTCATGa                                                                                                                                                   >  3:274278/1‑148 (MQ=255)
        tATCTAGGTTTTCTGGTCATCGTGACGGGCAGTCTCTGAGGCGTTATACACGCTTGGTAGTGCGTGAAGCTGACCTGGCACTGTAGCTACATTGCTGGGCCCGTTCACCCTGGACAGCCTGCTCCAATCAATGGGTGGCTCATGaaaa                                                                                                                                                <  4:274278/148‑1 (MQ=255)
          tCAAGGGTTTCAGGTCATCGTGACGGGCACTCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGaaaa                                                                                                                                                <  5:331526/146‑1 (MQ=255)
            aaGGGTTTCAGGTCATCGTGACGGGCACTCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGaaaa                                                                                                                                                >  6:13315/1‑144 (MQ=255)
            aaGGGTTTCAGGTCATCGTGACGGGCACTCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGaa                                                                                                                                            <  6:365217/148‑1 (MQ=255)
            aaGGGTTTCAGGTCATCGTGACGGGCACTCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGaa                                                                                                                                            <  2:106309/148‑1 (MQ=255)
            aaGGGTTTCAGGTCATCGTGACGGGCACTCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGaa                                                                                                                                            <  4:294943/148‑1 (MQ=255)
            aaGGGTTTCAGGTCATCGTGACGGGCACTCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAg                                                                                                                                           >  2:100072/1‑149 (MQ=255)
            aaGGGTTTCAGGTCATCGTGACGGGCACTCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAg                                                                                                                                           >  2:258529/1‑149 (MQ=255)
                 tttCAGGTCATCGTGACGGGCACTCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATg                                                                                                                                      <  1:100072/149‑1 (MQ=255)
                      ggTCATCGTGACGGGCACTCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAAt                                                                                                                                 <  7:291707/149‑1 (MQ=255)
                       gTCATCGTGACGGGCACTCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGGACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCAt                                                                                                                                                     >  8:305162/1‑128 (MQ=255)
                       gTCATCGTGACGGGCACTCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGGACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCAt                                                                                                                                                     <  7:305162/128‑1 (MQ=255)
                       gTCATCGTGACGGGCACTCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATg                                                                                                                                >  8:35997/1‑149 (MQ=255)
                        tCATCGTGACGGGCACTCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGTTCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATgg                                                                                                                               <  7:95941/149‑1 (MQ=255)
                                    gCACTCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCa                                                                                                                   <  7:25373/149‑1 (MQ=255)
                                     cACTCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGc                                                                                                                    <  2:135238/147‑1 (MQ=255)
                                     cACTCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGc                                                                                                                    >  1:135238/1‑147 (MQ=255)
                                        tCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATg                                                                                                                                                    >  2:205382/1‑112 (MQ=255)
                                        tCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACctc                                                                                                               >  7:324084/1‑149 (MQ=255)
                                          gCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACctctc                                                                                                             <  4:162009/149‑1 (MQ=255)
                                          gCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACctctc                                                                                                             >  2:70430/1‑149 (MQ=255)
                                                  gTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑Cg                                                                                                      >  1:28413/1‑147 (MQ=255)
                                                  gTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGaa                                                                                                    <  7:201038/149‑1 (MQ=255)
                                                       aCCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCg                                                                                               >  1:164604/1‑149 (MQ=255)
                                                         ccccTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGt                                                                                              >  3:152011/1‑148 (MQ=255)
                                                         ccccTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGt                                                                                              >  8:159640/1‑148 (MQ=255)
                                                           ccTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCaa                                                                                           >  6:225324/1‑149 (MQ=255)
                                                            cTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAAc                                                                                          >  4:321200/1‑149 (MQ=255)
                                                               ggTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACg                                                                                         <  2:248824/147‑1 (MQ=255)
                                                               ggTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGa                                                                                       <  1:197525/149‑1 (MQ=255)
                                                                   gagCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGa                                                                                   >  6:224118/1‑149 (MQ=255)
                                                                     gacttcgtccagagaggtgcaaggtacatccatttgcatgacttccttttcatgAGCCTGCTCCAATCAATCGCAGGCTc                                                                                                                                                       <  8:54123‑M1/26‑1 (MQ=255)
                                                                     gacttcgtccagagaggtgcaaggtacatccatttgcatgacttccttttcatgAGCCTGCTCCAATCAATCGCAGGCTc                                                                                                                                                       <  8:48926‑M1/26‑1 (MQ=255)
                                                                     gacttcgtccagagaggtgcaaggtacatccatttgcatgacttccttttcatgAGCCTGCTCCAATCAATCGCAGGCTc                                                                                                                                                       >  7:48926‑M1/55‑80 (MQ=255)
                                                                     gCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGAt                                                                                  >  4:205714/1‑148 (MQ=255)
                                                                             cGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑Ac                                                                        <  3:114145/149‑1 (MQ=255)
                                                                              ggACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑Acc                                                                       <  5:224118/149‑1 (MQ=255)
                                                                                  cTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGAt                                                                                                                             <  6:322985/93‑1 (MQ=255)
                                                                                   tGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGc                                                                  >  5:126794/1‑149 (MQ=255)
                                                                                   tGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCCGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAg                                                                   >  2:217409/1‑148 (MQ=255)
                                                                                       acaGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCg                                                              >  4:109815/1‑149 (MQ=255)
                                                                                         aGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGtt                                                            <  3:109815/149‑1 (MQ=255)
                                                                                          gAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTTATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGttt                                                           >  2:212582/1‑149 (MQ=255)
                                                                                           aaGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGACCGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGttt                                                           <  1:258529/149‑1 (MQ=255)
                                                                                             gCTACACTGCACGCCCCGATCACCCACGACAACCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGc                                                        >  8:107127/1‑149 (MQ=255)
                                                                                              cTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCt                                                       >  6:319063/1‑149 (MQ=255)
                                                                                               tACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCACGCTCATGAAAAGGAAGTCATGCAAAAGGATGTAACTTGCAACTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAAACG‑ACCGCAGCCACGTTTCGCt                                                       >  5:249597/1‑148 (MQ=255)
                                                                                               tACACTGCACGCCCCGATCACCCACGACACCCTGCTCCAATCAATCGCAGGCTCAACAAAAGGAAGTCATGCAAATGGATCTACCTTGCCCCACTCTGGA‑CGAAGTCCGTCAACGCATCGATAAAATCG‑ACCCCACCCTCCTATCGCt                                                       >  5:237230/1‑148 (MQ=255)
                                                                                                acacTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTtc                                                     >  2:336923/1‑149 (MQ=255)
                                                                                                 cacTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCtt                                                      <  7:159640/147‑1 (MQ=255)
                                                                                                    tGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGaaa                                                                              <  2:265776/121‑1 (MQ=255)
                                                                                                      cACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGcc                                                >  3:330948/1‑148 (MQ=255)
                                                                                                      cACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCAAGCAAATCGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGcc                                                >  8:19737/1‑148 (MQ=255)
                                                                                                       aCGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCg                                                  <  1:264836/145‑1 (MQ=255)
                                                                                                       aCGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCa                                               >  7:56635/1‑148 (MQ=255)
                                                                                                           cccGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGt                                          >  8:189975/1‑149 (MQ=255)
                                                                                                           ccagATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGt                                          >  6:349087/4‑149 (MQ=255)
                                                                                                             cGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTgg                                        <  6:126794/149‑1 (MQ=255)
                                                                                                                tCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGaa                                      <  7:52802/148‑1 (MQ=255)
                                                                                                                   cccACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGAAGGcg                                  >  6:262226/1‑148 (MQ=255)
                                                                                                                    ccACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCGTACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGaa                                      <  1:60214/145‑1 (MQ=255)
                                                                                                                    ccACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGAAGGCTc                                 <  3:146305/149‑1 (MQ=255)
                                                                                                                     cACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCg                                                                                    <  3:272171/98‑1 (MQ=255)
                                                                                                                      aCGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGAAGGCTCGt                               <  5:349087/149‑1 (MQ=255)
                                                                                                                      aCGACAGCCTGCTCCAATCAATCGAAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACATTGCACCTATCTGGA‑CGAATTCCGTCAACGGATCGATTAAATCG‑ACAGCAGCCTCGTTTCGCTTCTCGCCAAACGTGTAAGGCTctt                               >  2:95256/1‑147 (MQ=255)
                                                                                                                        gACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGAAGGCTCGTGa                             >  6:73177/1‑149 (MQ=255)
                                                                                                                        atgagcctgcgattgattggagcaggctCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCa                                                                                                                   <  4:86815‑M2/37‑1 (MQ=255)
                                                                                                                        atgagcctgcgattgattggagcaggctCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCa                                                                                                                   >  3:86815‑M2/29‑65 (MQ=255)
                                                                                                                        atgagcctgcgattgattggagcaggctCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGAAGGCTCGTGa                             >  2:1110‑M2/29‑149 (MQ=255)
                                                                                                                        atgagcctgcgattgattggagcaggctCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGAAGGCTCGTGa                             >  1:322240‑M2/29‑149 (MQ=255)
                                                                                                                          gagcctgcgattgattggagcaggctCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTc                                                                                                 >  7:54123‑M2/27‑80 (MQ=255)
                                                                                                                          gagcctgcgattgattggagcaggctCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTc                                                                                                 >  7:48926‑M2/27‑80 (MQ=255)
                                                                                                                          gagcctgcgattgattggagcaggctCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTc                                                                                                 <  8:54123‑M2/54‑1 (MQ=255)
                                                                                                                          gagcctgcgattgattggagcaggctCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTc                                                                                                 <  8:48926‑M2/54‑1 (MQ=255)
                                                                                                                          cAGCCTGCTCCAATCAATCGCAGGCTTATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGAAGGCTCGTGACg                           <  1:212582/149‑1 (MQ=255)
                                                                                                                             CCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGAAGGCTCGTGACGc                          <  2:44115‑M1/147‑1 (MQ=255)
                                                                                                                             CCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGAAGGCTCGTGACGc                          <  4:167152‑M1/147‑1 (MQ=255)
                                                                                                                             CCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCACTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCT‑ACCTCAGCCTCGTATCGCTTCTCTCGAAACGTTGAAGCCTCGTCACGCaa                        <  8:300523‑M1/149‑1 (MQ=255)
                                                                                                                             CCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATCTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGAAGGCTCGTGACGc                          <  8:103902‑M1/147‑1 (MQ=255)
                                                                                                                                   ccAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑cttc                                                                                                    <  4:201402/68‑4 (MQ=255)
                                                                                                                                   ccAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑cttc                                                                                                    >  3:201402/1‑65 (MQ=255)
                                                                                                                                     aatcaatcGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGAAGGc                                   <  1:225912/130‑1 (MQ=255)
                                                                                                                                     aatcaatcGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGAAGGCTCGTGACGCAAGCAGCggg                <  7:189975/149‑1 (MQ=255)
                                                                                                                                      atcaatcGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGAAGGCTCGTGACGCAAGCAGCGGGc               >  1:12520/1‑149 (MQ=255)
                                                                                                                                           tcGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGAAGGCTCGTGACGCaa                        <  4:123604/135‑1 (MQ=255)
                                                                                                                                           tcGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGAAGGCTCGTGACGCAAGCAGCGGGCTTc            >  2:273492/1‑147 (MQ=255)
                                                                                                                                           tcGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGAAGGCTCGTGACGCAAGCAGCGGGCTTCa           >  5:56212/1‑148 (MQ=255)
                                                                                                                                             gcaggctCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGAAGGCTCGTGACGCAAGCAGCGGGCTTCAAg         >  3:326030‑M2/8‑148 (MQ=255)
                                                                                                                                                   tCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTtctc                                                   <  1:108664‑M2/99‑1 (MQ=255)
                                                                                                                                                   tCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGAAGGCTCGTGACGCAAGCAGCGGGCTTCAAGAAAACCa  >  3:183534‑M2/2‑149 (MQ=255)
                                                                                                                                                   tCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGAAGGCTCGTGACGCAAGCAGCGGGCTTCAAGAAAACCa  >  2:64687‑M2/2‑149 (MQ=255)
                                                                                                                                                   tCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGAAGGCTCGTGACGCAAGCAGCGGGCTTCAAGAAAACCa  >  2:371597‑M2/2‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
CCTGCGTGTATCAAGGGTTTCAGGTCATCGTGACGGGCACTCGCTGCGGCGTTATACCCCCTCGGTAGAGCGTGAAGCGGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTGCACCTCTCTGGA‑CGAAGTCCGTCAACGGATCGATGAAATCG‑ACCGCAGCCTCGTTTCGCTTCTCGCCAAACGTGGAAGGCTCGTGACGCAAGCAGCGGGCTTCAAGAAAACCA  >  NC_002947/2476687‑2476982

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.