New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5492542 =	48 (0.820)	4 (0.070)	4/248	NT	8.5%	coding (1474/1698 nt)	cobJ	precorrin‑3B C17‑methyltransferase
	?	NC_002947	5492572 =	40 (0.710)					coding (1444/1698 nt)	cobJ	precorrin‑3B C17‑methyltransferase

ACCATTTCTGGCAGCAGTTCGGCCAAGGTGACTACCTTCAGCGTCTGCCCCGGCCTACCGATGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCTTTTCAATGATCGACCAGGGCTTGAGGTTGTCCGACAGCGACATCACGCAGAAGTCATGCCCCAGCGGTGCACCTGCCT  >  NC_002947/5492427‑5492712                                                                                                                                                    |                                                                                                                                             aCCATTTCTGGCAGCAGTTCGGCCAAGGTGACTACCTTCAGCGTCTGCCCCGGCCTACCGATGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCtt                                                                                                                                           >  7:209002/1‑149 (MQ=255)   ctgcgtgatgtcgctgtcggacaacctcaagccctggtcgatcattgaaaagcgcctggacctggctgcccaggccgacctggtgctggccttctacaacccgatctccaaggCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCtt                                                                                                                                           >  7:320853‑M1/114‑147 (MQ=255)    aTTTCTGGCAGCAGTTCGGCCAAGGTGACTACCTTCAGCGTCTGCCCCGGCCTACCGATGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGga                                                                                                                                        <  4:271965/149‑1 (MQ=255)     tttCTGGCAGCAGTTCGGCCAAGATGACTACCTTCAGCGTCTGCCCCGGCCTACCGATGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTg                                                                                                                                          >  5:296609/1‑146 (MQ=255)           gcagcaGTTCGGCCAAGGTGACTACCTTCAGCGTCTGCCCCGGCCTACCGATGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCggg                                                                                                                                 <  4:268911/149‑1 (MQ=255)           gcagcaGTTCGGCCAAGGTGACTACCTTCAGCGTCTGCCCCGGCCTACCGATGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCg                                                                                                                                   <  5:313398/147‑1 (MQ=255)             tgtcgctgtcggacaacctcaagccctggtcgatcattgaaaagcgcctggacctggctgcccaggccgacctggtgctggccttctacaacccgatctccaaggccagggccacaccgagctggtgcggcctggCCTTGGAGATCggg                                                                                                                                 <  1:20101‑M2/14‑1 (MQ=255)             tcgctgtcggacaacctcaagccctggtcgatcattgaaaagcgcctggacctggctgcccaggccgacctggtgctggccttctacaacccgatctccaaggCCAGGGCCACACCGAGCT‑GGTGCggcc‑tggcct                                                                                                                                            >  1:98635‑M1/104‑136 (MQ=255)             tcgctgtcggacaacctcaagccctggtcgatcattgaaaagcgcctggacctggctgcccaggccgacctggtgctggccttctacaacccgatctccaaggCCAGGGCCACACCGAGCT‑GGTGCggcc‑tggcct                                                                                                                                            <  2:98635‑M1/33‑1 (MQ=255)                agTTCGGCCAAGGTGACTACCTTCAGCGTCTGCCCCGGCCTACCGATGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTa                                                                                                                            <  1:366517/149‑1 (MQ=255)                     ggCCAAGGTGACTACCTTCAGCGTCTGCCCCGGCATACCGATGTAACGTCCAAGGACTACAGGCGTGTTCCCTTCACTATGTCTGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAg                                                                                                                        <  7:93707/148‑1 (MQ=255)                      gCCAAGGTGACTACCTTCAGCGTCTGCCCCGGCCTACCGATGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGc                                                                                                                      >  5:239920/1‑149 (MQ=255)                         aaGGTGACTACCTTCAGCGTCTGCCCCGGCCTACCGATGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAg                                                                                                                   >  3:246833/1‑149 (MQ=255)                                 tACCTTCAGCGTCTGCCCCGGCCTACCGATGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGt                                                                                                           >  8:125605/1‑149 (MQ=255)                                 tACCTTCAGCGTCTGCCCCGGCCTACCGATGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGt                                                                                                           >  2:196882/1‑149 (MQ=255)                                    cTTCAGCGTCTGCCCCGGCCTACCGATGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTa                                                                                                                            <  6:355488/129‑1 (MQ=255)                                    cTTCAGCGTCTGCCCCGGCCTACCGATGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTa                                                                                                                            >  5:355488/1‑129 (MQ=255)                                                ccccGGCCTACCGATGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGACGGCCAGCACCAGGTCGGCCTGGGCAGc                                                                                              >  5:113179/1‑147 (MQ=255)                                                ccccGGCCTACCGATGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGc                                                                                              >  7:81596/1‑147 (MQ=255)                                                  ccGGCCTACCGATGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAgg                                                                                          >  3:89045/1‑149 (MQ=255)                                                   cGGCCTACCGATGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGt                                                                                         <  3:50363/149‑1 (MQ=255)                                                     gCCTACCGATGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTcc                                                                                       <  4:243775/149‑1 (MQ=255)                                                       cTACCGATGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGcc                                                                                             <  8:62006/141‑1 (MQ=255)                                                       cTACCGATGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAg                                                                                     <  7:125605/149‑1 (MQ=255)                                                       cTACCGATGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAACGCCAGCACCAGGTCGGCCTGGGCAGCCaacatcg                                                                                      >  7:62006/1‑142 (MQ=255)                                                              tGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCttt                                                                              <  6:296609/149‑1 (MQ=255)                                                                tCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCtttt                                                                             >  7:75968/1‑148 (MQ=255)                                                                  aCGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTgg                                                                                                                                         <  6:309385/86‑1 (MQ=255)                                                                  aCGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTgg                                                                                                                                         >  5:309385/1‑86 (MQ=255)                                                                  aCGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCTTTTCaa                                                                          <  7:268893/149‑1 (MQ=255)                                                                   cGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCTTTTCAAt                                                                         <  8:81596/149‑1 (MQ=255)                                                                       cAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCTTTTCAATGATc                                                                     >  6:222494/1‑149 (MQ=255)                                                                       cAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCTTTTCAATGATc                                                                     <  8:209002/149‑1 (MQ=255)                                                                            aCTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCTTTTCAATGATCGACCa                                                                <  2:337935/149‑1 (MQ=255)                                                                                cAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCTTTTCAATGATCGACCAgg                                                              <  6:239920/147‑1 (MQ=255)                                                                                        ttCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCTTTTCAATGATCGACCAGGGCTTGAGGtt                                                    >  2:208892/1‑149 (MQ=255)                                                                                                  gATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCTTTTCAATGATCGACCAGGGCTTGAGGTTGTCCGACAGc                                          <  4:246833/149‑1 (MQ=255)                                                                                                      tCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCTTTTCAATGATCGACCAGGGCTTGAGGTTGTCCGACAGCGACa                                      >  8:143432/1‑149 (MQ=255)                                                                                                      cccgatctccaaggCCAGG‑CCGCACC‑AGCTCGGTGTGGCCCTGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCTTTTCAATGATCGACCAGGGCTTGAGGTTGTCCGACAGCGACa                                      <  1:20101‑M1/135‑1 (MQ=255)                                                                                                          cgcACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCTTTTCAATGATCGACCAGGGCTTGAGGTTGTCCGACAGCGACATCAc                                  <  3:105758/149‑1 (MQ=255)                                                                                                                aCCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCTTTTCAATGATCGACCAGGGCTTGAGCTTGTCCGACAGCGACATCACGCAGaa                            <  1:196882/149‑1 (MQ=255)                                                                                                                 ccTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCTTTTCAATGATCGACCAGGGCTTGAGGTTGTCCGACAGCGACATCACGCAGAAg                           >  4:123572/1‑149 (MQ=255)                                                                                                                  aaggccaggccgcaccagctcggtgtggccctggCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCTTTTCAATGATCGACCAGGGCTTGAGGTTGTCCGACAGCGACATCACGCAg                              >  7:320853‑M2/35‑147 (MQ=255)                                                                                                                   aggccaggccgcaccagctcggtgtggccctggCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCTTTTCAATGATCGACCAGGGCTTGAGGTTGTCCGACAGCGa                                        >  1:98635‑M2/34‑136 (MQ=255)                                                                                                                   aggccaggccgcaccagctcggtgtggccctggCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCTTTTCAATGATCGACCAGGGCTTGAGGTTGTCCGACAGCGa                                        <  2:98635‑M2/103‑1 (MQ=255)                                                                                                                          ccACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCTTTTCAATGATCGACCAGGGCTTGAGGTTGTCCGACAGCGACATCACGCAGAAGTCATGcccc                  <  3:123572/149‑1 (MQ=255)                                                                                                                              acCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAg                                                                                     >  3:336647/1‑78 (MQ=255)                                                                                                                              acCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAg                                                                                     <  4:336647/78‑1 (MQ=255)                                                                                                                                cGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCTTTTCAATGATCGACAAGGGCTTGAGGTTGTCCGACAGCCACATGACGAAGAACTCATGCCCCAGCTGt            >  4:244673/1‑149 (MQ=255)                                                                                                                                        gTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCTTTTCAATGATCGACCAGGGCTTGAGGTTGTCCGACAGCGACATCACGCAGAAGTCATGCCCCAGCGGTGCAcctg     >  5:316898/1‑149 (MQ=255)                                                                                                                                         tGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCAACAGGTCGGCCTGGGCAGACAGGTCCAGGCGCTTTTCAATGATCGACCAGGGCTTGAGGTTGTCAGACAGAGACATCACGCAGAAGTCATGACCCAGCGGTGCAcctgc    >  5:7316/1‑149 (MQ=255)                                                                                                                                           cGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCTTTTCAATGATCGACCAGGGCTTGAGGTTGTCCGACAGCGACATCACGCAGAAGTCATGCCCCAGCGGTGCAcctgcct  <  5:222494/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                             ACCATTTCTGGCAGCAGTTCGGCCAAGGTGACTACCTTCAGCGTCTGCCCCGGCCTACCGATGTCACGGCCAAGGACTACAGGCGTGTTCCCGTCACGATGTCGGCGCACAACCTCCAGGGCCACACCGAGCT‑GGTGCGGCC‑TGGCCTTGGAGATCGGGTTGTAGAAGGCCAGCACCAGGTCGGCCTGGGCAGCCAGGTCCAGGCGCTTTTCAATGATCGACCAGGGCTTGAGGTTGTCCGACAGCGACATCACGCAGAAGTCATGCCCCAGCGGTGCACCTGCCT  >  NC_002947/5492427‑5492712

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.