New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5596413	63 (1.070)	3 (0.050)	3/242	NT	5.3%	intergenic (‑79/‑87)	PP_mr58/PP_4923	TPP regulatory region/outer membrane efflux protein
	?	NC_002947	= 5596446	49 (0.890)					intergenic (‑112/‑54)	PP_mr58/PP_4923	TPP regulatory region/outer membrane efflux protein

AGCCTTTGCTTCAAGGCACCCCGACAAGAACATGCGCAGTCTAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTGGCGATAGCCGTGTCTTGTGCGTCCAACGGAGTGGTCTGGGCAGCGGACGTGCCCTCGACAGTCAAAACCGAT  >  NC_002947/5596307‑5596592                                                                                                                                            |                                                                                                                                                   aGCCTTTGCTTCAAGGCACCCCGACAAGAACATGCGCAGTCTAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCatcgctc                                                                                                                                             >  5:126464‑M2/1‑140 (MQ=255) aGCCTTTGCTTCAAGGCACCCCGACAAGAACATGCGCAGTCTAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCatcgct                                                                                                                                              >  8:92652‑M2/1‑140 (MQ=255) aGCCTTTGCTTCAAGGCACCCCGACAAGAACATGCGCAGTCTAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCatc                                                                                                                                                 >  4:50004‑M2/1‑140 (MQ=255) aGCCTTTGCTTCAAGGCACCCCGACAAGAACATGCGCAGTCTAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGa                                                                                                                                           >  7:85630/1‑149 (MQ=255)   ccTTTGCTTCAAGGCACCCCGACAAGAACATGCGCAGTCTAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATa                                                                                                                                         >  1:277171/1‑149 (MQ=255)       tGCTTCAAGGCACCCCGACAAGAACATGCGCAGTCTAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACt                                                                                                                                       <  6:57805/147‑1 (MQ=255)         cTTCAAGGCACCCCGACAAGAACATGCGCAGTCTAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCaa                                                                                                                                    <  8:304083/148‑1 (MQ=255)          ttCAAGGCACCCCGACAAGAACATGCGCAGTCTAGACTGGAGTTGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTc                                                                                                                                      <  7:6941/145‑1 (MQ=255)          ttCAAGGCACCCCGACAAGAACATGCGCAGTCTAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTc                                                                                                                                      >  8:6941/1‑145 (MQ=255)            cAAGGCACCCCGACAAGAACATGCGCAGTCTAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACa                                                                                                                                  <  2:277171/147‑1 (MQ=255)               ggCACCCCGACAAGAACATGCGCAGTCTAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCa                                                                                                                             <  5:65785/149‑1 (MQ=255)                    cccGACAAGAACATGCGCAGTCTAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAAt                                                                                                                        >  2:195231/1‑149 (MQ=255)                    cccGACAAGAACATGCGCAGTCTAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCGCGCTACTCAACAGTTCAGTAAt                                                                                                                        >  7:244584/1‑149 (MQ=255)                            gAACATGCGCAGTCTAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTc                                                                                                                <  6:344338/149‑1 (MQ=255)                            gAACATGCGCAGTCTAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTc                                                                                                                >  5:344338/1‑149 (MQ=255)                             aaCATGCGCAGTCTAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCg                                                                                                               >  3:168057/1‑149 (MQ=255)                              aCATGCGCAGTCTAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTc                                                                                                                <  1:21133/147‑1 (MQ=255)                              aCATGCGCAGTCTAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTc                                                                                                                >  2:21133/1‑147 (MQ=255)                              aCATGCGCAGTCTAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCg                                                                                                               >  4:8630/1‑148 (MQ=255)                                  acgcAGTCTAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTAc                                                                                                            >  4:135453/2‑147 (MQ=255)                                       gTCTAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGAtt                                                                                                     <  2:263064/149‑1 (MQ=255)                                          tAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGa                                                                                                                                           <  6:89280/108‑1 (MQ=255)                                          tAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGa                                                                                                                                           >  5:89280/1‑108 (MQ=255)                                            gACTGGAGTGTTCAGCAAAGCGAAGGAGGTAAATGCGCGGATGATTAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTGAACAGTTCAGTAATTAAATTTCGTACAAGGATTGc                                                                                                   <  7:105663/146‑1 (MQ=255)                                             aCTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCctc                                                                                                >  4:231624/1‑148 (MQ=255)                                                 gAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTAtgc                                                                                           <  4:65830/149‑1 (MQ=255)                                                      gTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTgcg                                                                                       >  5:170390/1‑148 (MQ=255)                                                       tCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTgcgc                                                                                      >  6:11993/1‑148 (MQ=255)                                                         aGCAAAGCTAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCaaa                                                                                   >  5:268551/1‑149 (MQ=255)                                                           cAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAAc                                                                                  >  6:281747/1‑148 (MQ=255)                                                            aaaGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAActc                                                                                <  3:231624/149‑1 (MQ=255)                                                                  aaGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTg                                                                          <  4:168057/149‑1 (MQ=255)                                                                  aaGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTg                                                                          >  7:270224/1‑149 (MQ=255)                                                                   aGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTgg                                                                         >  3:27435/1‑149 (MQ=255)                                                                        gTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCAc                                                                            >  8:181466/1‑141 (MQ=255)                                                                        gTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCAc                                                                            <  7:181466/141‑1 (MQ=255)                                                                        gTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTGGCGATa                                                                    <  8:270224/149‑1 (MQ=255)                                                                           aaTGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACt                                                                                                                                       >  6:314750/1‑79 (MQ=255)                                                                           aaTGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACt                                                                                                                                       <  5:314750/79‑1 (MQ=255)                                                                           aaTGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTGGCGATAGcc                                                                 <  7:336995/149‑1 (MQ=255)                                                                             tGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTGGCGATAGCCgt                                                               <  3:8630/149‑1 (MQ=255)                                                                                gcgGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTGGCGATAGCCGTGTc                                                            >  8:261661/1‑149 (MQ=255)                                                                                  ggATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTGGCGATAGCCGTGTCtt                                                          <  1:195231/149‑1 (MQ=255)                                                                                  ggATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTGGCGATAGCCGTGTCtt                                                          <  5:281747/149‑1 (MQ=255)                                                                                         gaAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGTTTGCCTCTATGCTGCGCAAACTCTCACTGGCGATAGCCGTGTCTTGTGCGTc                                                   >  6:255184/1‑149 (MQ=255)                                                                                                acacCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCGACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTGGCGATAGCCGTGTCTTGTGCGTCCAACGGa                                            <  8:85630/149‑1 (MQ=255)                                                                                                  acCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCatcgctcggtgtgcctttcatcatccgcgcatttacctgcttggctttgctgaccactccagtctagactgcgcatgttcttgtcggggtgccttgaagcaaaggc                                          <  5:298388‑M2/149‑107 (MQ=255)                                                                                                   cccaGCGATTGGTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTGGCGATAGCCGTGTCTTGTGCGTCCAACGGAGTg                                         <  4:289102/146‑1 (MQ=255)                                                                                                   ccGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCatcgctcggtgtgcctttcatcatccgcgcatttacctgcttggctttgctgaccactccagtctagactgcgcatgttcttgtcggggtgccttgaagcaaaggct                                         <  8:117475‑M2/149‑108 (MQ=255)                                                                                                         gATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTGGCGATAGCCGTGTCTTGTGCGTCCAACGGAGTGGTCTgg                                   >  6:378258/1‑149 (MQ=255)                                                                                                              ttgCCGGGTGCGCATGGCACTACACTGGCCCatcgctcggtgtgcctttcatcatccgcgcatttacctgcttggctttgctgaccactccagtctagactgcgcatgttcttgtcggggtgccttgaagcaaaggctgagatcgcag                               >  6:298388‑M2/1‑31 (MQ=255)                                                                                                                   gggTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTGGCGATAGCCGTGTCTTGTGCGTCCAACGGAGTGGTCTGGGCAGCGGACg                         >  2:285584/1‑149 (MQ=255)                                                                                                                     gTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTGGCGATAGCCGTGTCTTGTGCGTCCAACGGAGTGGTCTGGGCAGCGGACGTg                       <  6:170390/149‑1 (MQ=255)                                                                                                                      tGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTGGCGATAGCCGTGTCTTGTGCGTCCAACGGAGTGGTCTGGGCAGCGGACGTGc                      <  5:11993/149‑1 (MQ=255)                                                                                                                           aTGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTGGCGATAGCCGTGTCTTGTGCGTCCAACGGAGTGGTCTGGGCAGCGGACGTGCCCTc                  >  4:342446/1‑148 (MQ=255)                                                                                                                              gCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGTTTGCCTCTATGCTGCGCAAACTCTCACTGGCGATAGCCGTGTCTTGTGCGTCCAACGGAGTGGTCTGGGCAGCGGACGTGCCCTCGACa              <  5:255184/149‑1 (MQ=255)                                                                                                                              gCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTGGCGATAGCCGTGTCTTGTGCGTCCAACGGAGTGGTCTGGGCAGCGGACGTGCCCTCGACa              <  1:285584/149‑1 (MQ=255)                                                                                                                              gCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTGGCAATAGCCGTGTCTTGTGCGTCCAACGGAGTGGTCTGGGCAGCGGACGTGCCCTCGACa              <  6:268551/149‑1 (MQ=255)                                                                                                                                    cacTGGCCCATCGCTCGATACTCAAGAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTGGCGATAGCCGTGTCTTGTGCGTCCAACGGAGTGGTCTGGGCAGCGGACGTGCCCTCGACa              <  3:50975/143‑1 (MQ=255)                                                                                                                                    cacTGGCCCATAGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAACGATTGCCTCTATGCTGCGCAAACTCTCACAGGCGATACCCGTCTCATCTGCGTCCAACGGAGTGTTCTGGGCAGCGGACGTGCCCACGACa              >  4:50975/1‑143 (MQ=255)                                                                                                                                      cTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTGGCGATAGCCGTGTCTTGTGCGTCCAACGGAGTGGTCTGGGCAGCGGACGTGCCCTCGACAGTCAAAAc      <  5:378258/149‑1 (MQ=255)                                                                                                                                       tGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTGGCGATAGCCGTGTCTTGTGCGTCCAACGGAGTGGTCTGGGCAGCGGACGTGCCCTCGACAGTCAAAAcc     >  2:364697/1‑149 (MQ=255)                                                                                                                                          cccATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTGGCGATAGCCGTGTCTTGTGCGTCCAACGGAGTGGTCTGGGCAGCGGACGTGCCCTCGACAGTCAAAACCGAt  <  3:135453/149‑1 (MQ=255)                                                                                                                                            |                                                                                                                                                   AGCCTTTGCTTCAAGGCACCCCGACAAGAACATGCGCAGTCTAGACTGGAGTGGTCAGCAAAGCCAAGCAGGTAAATGCGCGGATGATGAAAGGCACACCGAGCGATTGTTGCCGGGTGCGCATGGCACTACACTGGCCCATCGCTCGATACTCAACAGTTCAGTAATTAAATTTCGTACAAGGATTGCCTCTATGCTGCGCAAACTCTCACTGGCGATAGCCGTGTCTTGTGCGTCCAACGGAGTGGTCTGGGCAGCGGACGTGCCCTCGACAGTCAAAACCGAT  >  NC_002947/5596307‑5596592

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.