| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_002947 | 5,681,415 | +CGGG | intergenic (‑133/+71) | PP_4986 ← / ← PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5681415 | 1 (0.040) | 11 (0.440) +CGGG |
11/282 | 1.2 | 91.9% | intergenic (‑133/+71) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| ? | NC_002947 | 5681416 = | 1 (0.040) | intergenic (‑134/+70) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein | |||||
TTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCC > NC_002947/5681268‑5681558 | ttCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGCAGCGGCCCCCGGCTTTGATTGGCACTGCATGCACcgc > 1:41041/1‑148 (MQ=38) aCCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTTGCGAAATGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcg < 4:44417‑M1/147‑3 (MQ=255) tACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgct < 2:73164‑M1/148‑11 (MQ=255) aaCACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCATGCTTTGATTGCCACTGCATGCACCGCccgggctgcggcggaccc > 7:95695‑M1/1‑130 (MQ=255) aaCACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagcc < 6:9918‑M1/148‑19 (MQ=255) gTGGGCTTGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggc < 8:31097‑M1/148‑36 (MQ=255) gATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTAGCGAAAGGGGCGCCAAGCGGCCCCCCGCTTTCATTTCCACAGCATGAACCGCCGGGGCTGCTGCCCCCCCCAATAGCCCCACAAGGCCGCCCCCACACCCGACCCCCACGccc > 4:109264/1‑148 (MQ=255) ttGGGGGCGGGGCGTTGTGTCGCTAATGGGGCGCTAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgctacaaaaggccgctcccactccagaccaccaggccctgcgcctcacatc < 4:101978‑M1/147‑75 (MQ=255) ttGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgccgcccgatcgcgaccccaggccgcgccccctcccgcccaccaggcccggcgcctcccctcctaacccagggcagg > 1:79356‑M1/1‑59 (MQ=255) cAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagcccaccaggccctgcgcctcacatactaaccaaggtcaggttgcagatccgcgtcccgcaccagccttt > 1:93540‑M1/1‑29 (MQ=255) tttCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatagcgccacaaggccgctccccctccagcccaccaggccctgcgcctcacatcctaaccaaggtaaggttgcagatccgcggcacgcaccagccgttcccatg > 5:127778‑M1/1‑24 (MQ=255) aTGAACCGCcggggctgctgcgcagccctatagcgccacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccaggtccggta > 3:122227‑M1/1‑9 (MQ=255) ccgccggggctgctgggcagccctatcgctacaaatggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccaggtccggtacccgc < 6:57449‑M1/148‑145 (MQ=255) ccggggctgctgcgcagccctatcgcgacacaaggccgctccccctcccgaccccccggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttcccatgcgaccaggtccggtacccgcgcc > 5:43149‑M1/1‑1 (MQ=255) | TTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCC > NC_002947/5681268‑5681558 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |