| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_002947 | 5,681,415 | +CGGG | intergenic (‑133/+71) | PP_4986 ← / ← PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5681415 | 1 (0.040) | 11 (0.440) +CGGG |
11/282 | 1.2 | 91.9% | intergenic (‑133/+71) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| ? | NC_002947 | 5681416 = | 1 (0.040) | intergenic (‑134/+70) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein | |||||
TACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCC > NC_002947/5681278‑5681558 | tacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccggggctgct < 2:73164‑M2/6‑1 (MQ=255) aacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccatgctttgattgccactgcatgcaccgcccgggctgcggcggaccc > 7:95695‑M2/135‑143 (MQ=255) aacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGcc < 6:9918‑M2/14‑1 (MQ=255) gtgggcttggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGc < 8:31097‑M2/31‑1 (MQ=255) gATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTAGCGAAAGGGGCGCCAAGCGGCCCCCCGCTTTCATTTCCACAGCATGAACCGCCGGGGCTGCTGCCCCCCCCAATAGCCCCACAAGGCCGCCCCCACACCCGACCCCCACGccc > 4:109264/1‑148 (MQ=255) ttgggggcggggcgttgtgtcgctaatggggcgctaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCTACAAAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATc < 4:101978‑M2/70‑1 (MQ=255) ttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCCGCCCGATCGCGACCCCAGGCCGCGCCCCCTCCCGCCCACCAGGCCCGGCGCCTCCCCTCCTAACCCAGGGCAgg > 1:79356‑M2/64‑148 (MQ=255) caggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGCCCACCAGGCCCTGCGCCTCACATACTAACCAAGGTCAGGTTGCAGATCCGCGTCCCGCACCAGCCttt > 1:93540‑M2/34‑147 (MQ=255) tttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATAGCGCCACAAGGCCGCTCCCCCTCCAGCCCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTAAGGTTGCAGATCCGCGGCACGCACCAGCCGTTCCCATg > 5:127778‑M2/29‑148 (MQ=255) atgaaccgccgggGCTGCTGCGCAGCCCTATAGCGCCACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTa > 3:122227‑M2/14‑148 (MQ=255) ccgccgggGCTGCTGGGCAGCCCTATCGCTACAAATGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCcgc < 6:57449‑M2/140‑1 (MQ=255) ccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCCCTCCCGACCCCCCGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCCATGCGACCAGGTCCGGTACCCGCGcc > 5:43149‑M2/6‑148 (MQ=255) | TACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCC > NC_002947/5681278‑5681558 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |