New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	86825 =	51 (0.990)	3 (0.060) +A	3/258	NT	5.8%	intergenic (‑108/+37)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
	?	NC_002947	2301510 =	48 (0.930)					intergenic (‑154/‑177)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein

CACCAAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAA‑CCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/86910‑86825 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCA  >  NC_002947/2301510‑2301587                                                                                        |                                                                               caccctGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAACCTGTAATCTCACAATGCTACACACCAA‑CCCTGTGGGAGCGGGCATGCCCGCGAAAATGCCAACGCGTTGCTTGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCC                   <  4:104286/142‑1 CACCAAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAA‑CCCTGTGGGAGCGGGCATGCCCGCGAAAAAGCCAACGCGTTGCTTGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCC                   >  3:104286/1‑148                  ATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAAGCCCTGTGGGAGCGGGCATGCCCGCGAAAAAGCCAACGCGTTGCTTGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGGttgg  >  7:136804/1‑145                                                                                        |                                                                               CACCAAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAA‑CCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/86910‑86825 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCA  >  NC_002947/2301510‑2301587

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.