BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	86825 =	51 (0.990)	3 (0.060) +A	3/258	NT	5.8%	intergenic (‑108/+37)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
*	?	NC_002947	2301510 =	48 (0.930)	3 (0.060) +A	3/258	NT	5.8%	intergenic (‑154/‑177)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein

Only 100 of 109 total aligned reads displayed.

TGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTAC  >  NC_002947/2301365‑2301658

cttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGc                                                                                                                                                    >  8:251533‑M1/89‑148 (MQ=255)

     ctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCcgcg                                                                                                                                               <  7:299449‑M1/65‑1 (MQ=255)

        gatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCgaa                                                                                                                                             >  4:298784‑M1/81‑147 (MQ=255)

          tctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCgaagaa                                                                                                                                          >  5:145695‑M1/79‑148 (MQ=255)

            tcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCgaa                                                                                                                                             >  6:134043‑M1/77‑143 (MQ=255)

            tcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCgaa                                                                                                                                             <  5:134043‑M1/67‑1 (MQ=255)

              gatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCa                                                                                                                                      >  3:242056‑M1/75‑148 (MQ=255)

              gatggcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATcc                                                                                                                                       >  5:65391‑M1/75‑147 (MQ=255)

                  tcagtgcagatctgacgtcatgcgcatcctgtgtgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAAcgcg                                                                                                                                 >  6:246648‑M1/71‑149 (MQ=255)

                    agtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGt                                                                                                                               >  4:2253‑M1/69‑149 (MQ=255)

                    agtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGt                                                                                                                               >  1:185537‑M1/69‑149 (MQ=255)

                      tgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAGCTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTg                                                                                                                              <  6:237214‑M1/82‑1 (MQ=255)

                      tgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCgg                                                                                                                                >  6:250637‑M1/67‑146 (MQ=255)

                      tgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCgg                                                                                                                                <  5:250637‑M1/80‑1 (MQ=255)

                         agatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGc                                                                                                                             <  7:67034‑M1/83‑1 (MQ=255)

                           atctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATgg                                                                                                                         <  8:20523‑M1/87‑1 (MQ=255)

                               gacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCg                                                                                                                    <  3:301614‑M1/92‑1 (MQ=255)

                               gacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCg                                                                                                                    <  3:60231‑M1/92‑1 (MQ=255)

                                acgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCgg                                                                                                                   <  7:246547‑M1/93‑1 (MQ=255)

                                acgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCgg                                                                                                                   >  8:234920‑M1/57‑149 (MQ=255)

                                    catgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTgc                                                                                                               <  1:80140‑M1/97‑1 (MQ=255)

                                     atgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAAcg                                                                                                                                   <  4:149143‑M1/77‑1 (MQ=255)

                                     atgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTgcg                                                                                                              <  2:142785‑M1/98‑1 (MQ=255)

                                     atgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTgcg                                                                                                              <  8:305721‑M1/98‑1 (MQ=255)

                                       gcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGcc                                                                                                            <  1:277098‑M1/100‑1 (MQ=255)

                                        cgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGcc                                                                                                            >  2:80140‑M1/49‑148 (MQ=255)

                                         gcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCgg                                                                                                          >  8:299449‑M1/48‑149 (MQ=255)

                                           atcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGgtg                                                                                                        <  5:64209‑M1/104‑1 (MQ=255)

                                           atcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTACATGGCACCGGCTGCGCCGgtg                                                                                                        <  2:256695‑M1/104‑1 (MQ=255)

                                               tgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGAAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGCCTGCGCCGGTGTTcg                                                                                                    <  6:147081‑M1/108‑1 (MQ=255)

                                                gtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTgcgc                                                                                                             >  1:136850‑M1/41‑139 (MQ=255)

                                                   ttctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCgg                                                                                                 >  8:53952‑M1/38‑148 (MQ=255)

                                                          cgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGccc                                                                                         >  2:277098‑M1/31‑149 (MQ=255)

                                                          caccctggccgatggggatgccctggaggccgtcaaagccaacctgtaatctcacaatgctacacaccaaccctgtgggagcgggcaTGCCCGCGAAAATGCCAACGCGTTGCTTGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGcc                                                                                          <  4:104286‑M2/61‑1 (MQ=255)

                                                          caccaaggccgatggggatgccctggaggccgtcaaagccaaactgtaatctcacaaagcaacacaccaaccctgtgggagcgggcaTGCCCGCGAAAAAGCCAACGCGTTGCTTGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGcc                                                                                          >  3:104286‑M2/88‑148 (MQ=255)

                                                           gacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCg                                                                                        <  5:172239‑M1/120‑1 (MQ=255)

                                                           gacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCg                                                                                        <  1:324587‑M1/120‑1 (MQ=255)

                                                              agcgcagcccggaagggctcggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTCCAAGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTc                                                                                     <  7:10316‑M1/123‑1 (MQ=255)

                                                                  cagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCcac                                                                                 >  3:318811‑M1/23‑149 (MQ=255)

                                                                     cccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATg                                                                              <  4:19444‑M1/130‑1 (MQ=255)

                                                                       cggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATc                                                                                                                                        <  2:295023‑M1/72‑1 (MQ=255)

                                                                       cggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATc                                                                                                                                        >  1:295023‑M1/18‑89 (MQ=255)

                                                                          atgccctggaggccgtcaaagccaaactgtaatctcacaaagcaacacaccaagccctgtgggagcgggcaTGCCCGCGAAAAAGCCAACGCGTTGCTTGGCACCGGCTTTGCCGGTGTTCGCGGGCGCGCCCGCTCCcacagggttgg                                                                         >  7:136804‑M2/72‑145 (MQ=255)

                                                                             ggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGc                                                                      <  5:254599‑M1/138‑1 (MQ=255)

                                                                             ggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGc                                                                      >  2:324587‑M1/12‑149 (MQ=255)

                                                                                  ggtgatCTCTCATAGAACTGCGCATCACTTTCTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGc                                                                  >  6:254599‑M1/7‑148 (MQ=255)

                                                                                  ggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGcc                                                                 >  6:172239‑M1/7‑149 (MQ=255)

                                                                                    tgatCTCTCATAGATCTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTg                                                               >  5:237214‑M1/5‑149 (MQ=255)

                                                                                    tgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTg                                                               <  7:145343‑M1/145‑1 (MQ=255)

                                                                                    tgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTACCACATGGACCACGCTTGCCTg                                                               <  7:149605‑M1/145‑1 (MQ=255)

                                                                                         TCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCAtt                                                          <  4:45583‑M1/149‑1 (MQ=255)

                                                                                          CTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCAttt                                                         <  2:197873‑M1/149‑1 (MQ=255)

                                                                                           tcttAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCGGTGGGTGCGGGCGTTCCCGCGAAGAATCCAAGGCGGTTCATGGCACCGGCTGCGCCGGTTTTCGGGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCa                                                            <  5:147081/142‑1 (MQ=37)

                                                                                           tcATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCAtttt                                                        >  1:279726/1‑149 (MQ=255)

                                                                                             aTAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCAttttt                                                       <  4:60231/148‑1 (MQ=255)

                                                                                             aTAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCAttttt                                                       <  3:19444/148‑1 (MQ=255)

                                                                                             aTAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCAttttt                                                       <  6:64209/148‑1 (MQ=255)

                                                                                             aTAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTg                                                      >  8:72098/1‑149 (MQ=255)

                                                                                              tAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGt                                                     >  2:224116/1‑149 (MQ=255)

                                                                                                gAACTGCGCATCACTTAGTCATTTAGCAGGTACCCTTTGGGAGCTGGCTTTCGCTCTAAGAATCCAACTTGGTGCATGGCACCGTCTTCGCCGGTGTTCGCGGGCGCGCCCTCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCa                                                   <  8:10316/149‑1 (MQ=25)

                                                                                                gAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCa                                                   <  2:279726/149‑1 (MQ=255)

                                                                                                    tGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTg                                               >  1:292336/1‑149 (MQ=255)

                                                                                                      cgcATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGt                                              <  8:246547/148‑1 (MQ=255)

                                                                                                       gcATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGtct                                            >  4:197079/1‑149 (MQ=255)

                                                                                                          tCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGtt                                                >  4:86298/1‑142 (MQ=255)

                                                                                                          tCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGtt                                                <  3:86298/142‑1 (MQ=255)

                                                                                                          tCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGc                                         >  6:77445/1‑149 (MQ=255)

                                                                                                                 cTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGt                                                     >  3:309200/1‑130 (MQ=255)

                                                                                                                 cTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGt                                                     <  4:309200/130‑1 (MQ=255)

                                                                                                                 cTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGa                                   <  4:293773/148‑1 (MQ=255)

                                                                                                                 cTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGAt                                  >  1:258233/1‑149 (MQ=255)

                                                                                                                  tGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGAtt                                 >  8:249020/1‑149 (MQ=255)

                                                                                                                    aTTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGtt                                                <  3:309822/132‑1 (MQ=255)

                                                                                                                    aTTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGtt                                                >  4:309822/1‑132 (MQ=255)

                                                                                                                    aTTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTgc                               >  7:121068/1‑149 (MQ=255)

                                                                                                                    aTTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTgc                               >  7:138573/1‑149 (MQ=255)

                                                                                                                    aTTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTgc                               <  7:72098/149‑1 (MQ=255)

                                                                                                                        aGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTgcggcg                           >  3:67088/1‑149 (MQ=255)

                                                                                                                            gggACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGaa                        >  8:196057/1‑148 (MQ=255)

                                                                                                                             ggACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGaaa                       >  3:244770/1‑148 (MQ=255)

                                                                                                                                cccTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAAtt                   <  8:121068/149‑1 (MQ=255)

                                                                                                                                cccTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAAtt                   <  1:142785/149‑1 (MQ=255)

                                                                                                                                cccTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAAtt                   <  6:34492/149‑1 (MQ=255)

                                                                                                                                 ccTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAg                                                  <  2:83803/117‑1 (MQ=255)

                                                                                                                                 ccTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAg                                                  >  1:83803/1‑117 (MQ=255)

                                                                                                                                  cTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATtgt                 <  5:35776/149‑1 (MQ=255)

                                                                                                                                   tgtgGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATtgtg                >  5:116598/1‑149 (MQ=255)

                                                                                                                                     tgGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATtgtg                <  4:301614/147‑1 (MQ=255)

                                                                                                                                     tgGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGtt              >  3:60849/1‑149 (MQ=255)

                                                                                                                                      gggAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTc             <  7:305721/149‑1 (MQ=255)

                                                                                                                                       ggAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTc             >  4:262362/1‑148 (MQ=255)

                                                                                                                                        gAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAt                                                                               <  8:16562/81‑1 (MQ=255)

                                                                                                                                        gAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAt                                                                               >  7:16562/1‑81 (MQ=255)

                                                                                                                                        gAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGa           <  7:20523/149‑1 (MQ=255)

                                                                                                                                         aGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAg          <  6:116598/149‑1 (MQ=255)

                                                                                                                                           cGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGATGATTGCGGCGGAAAAATTGTGTTCGAGCa        <  1:197873/149‑1 (MQ=255)

                                                                                                                                            gggCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGa           <  8:25712/145‑1 (MQ=255)

                                                                                                                                            gggCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGa           >  7:25712/1‑145 (MQ=255)

                                                                                                                                                gTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTa   <  7:249020/149‑1 (MQ=255)

                                                                                                                                                 tGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGGTCCctgctaaatcagtaagtgatgcgcagttctatgagagatcacccagcccttccgggctgcgctgtcgcacag  <  6:335316‑M2/149‑73 (MQ=255)

TGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTAC  >  NC_002947/2301365‑2301658

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.