New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	113621 =	54 (1.050)	4 (0.080)	4/248	NT	7.3%	coding (285/738 nt)	PP_0107	hypothetical protein
	?	NC_002947	113680 =	50 (1.020)					coding (344/738 nt)	PP_0107	hypothetical protein

AGGTGCTACCGGGCGCGACATACACAGAGGCATCCAGCGCCAAGGCCTGGGCAGGGGTTTCGAAGTGCACCGGCACCCGGCGGTCCAGCCATGGCAGCCAGCCACGATTGATCAGCAACCACAGGCCGCTGGCTTGGTCGTGGAAGGGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/113772‑113621 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgcCATGGCTGGACCGCCGGGTGCCGGTGCACTTCGAAACCCCTGCCCAGGCCTTGGCGCTGGATGCCTCTGTGTATGTCGCGCCCGGTAGCACCTTCCAACTGCACCCGGACCCCATCGGCGGGC  >  NC_002947/113680‑113802                                                                                                                                                                                                                                                                                     AGGTGCTACCGGGCGCGACATACACAGAGGCATCCAGCGCCAAGGCCTGGGCAGGGGTTTCGAAGTGCACCGGCACCCGGCGGTCCAGCCATGGCAGCCAGCCACGATTGATCAGCAACCACAGGCCGCTGGCTTGGTCGTGGAAGGGC                                                                                                                                <  8:58908/149‑1                                                                                           ATGGCAGCCAGCCACGATTGATCAGCAACCACAGGCCGCTGGCTTGGTCGTGGAAGGGCTGCCATGGCTGGACCGCCGGGTGCCGGTGCACTTCGAAACCCCTGCCCAGGCCTTGGCGCTGGATGCCTCTGTGTATGTCGCGCCCGG                                        >  4:295047/1‑147                                                                                            TGGCAGCCAGCCACGATTGATCAGCAACCACAGGCCGCTGGCTTGGTCGTGGAAGGGCTGCCATGGCTGGACCGCCGGGTGCCGGTGCACTTCGAAACCCCTGCCCAGGCCTTGGCGCTGGATGCCTC                                                          <  1:237988/128‑1                                                                                            TGGCAGCCAGCCACGATTGATCAGCAACCACAGGCCGCTGGCTTGGTCGTGGAAGGGCTGCCATGGCTGGACCGCCGGGTGCCGGTGCACTTCGAAACCCCTGCCCAGGCCTTGGCGCTGGATGCCTC                                                          >  2:237988/1‑128                                                                                                                               CGCTGGCTTGGTCGTGGAAGGGCTGCCATGGCTGGACCGCCGGGTGCCGGTGCACTTCGAAACCCCTGCCCAGGCCTTGGCGCTGGATGCCTCTGTGTATGTCGCGCCCGGTAGCACCTTCCAACTGCACCCGGACCCCATCGGCGGGC  <  3:295047/149‑1                                                                                                                                                                                                                                                                                     AGGTGCTACCGGGCGCGACATACACAGAGGCATCCAGCGCCAAGGCCTGGGCAGGGGTTTCGAAGTGCACCGGCACCCGGCGGTCCAGCCATGGCAGCCAGCCACGATTGATCAGCAACCACAGGCCGCTGGCTTGGTCGTGGAAGGGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/113772‑113621 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgcCATGGCTGGACCGCCGGGTGCCGGTGCACTTCGAAACCCCTGCCCAGGCCTTGGCGCTGGATGCCTCTGTGTATGTCGCGCCCGGTAGCACCTTCCAACTGCACCCGGACCCCATCGGCGGGC  >  NC_002947/113680‑113802

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.