| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 330293 | 54 (1.050) | 4 (0.080) | 3/252 | NT | 8.6% | coding (183/2298 nt) | PP_0272 | ferric siderophore receptor |
| ? | NC_002947 | = 330340 | 33 (0.660) | coding (230/2298 nt) | PP_0272 | ferric siderophore receptor | |||||
TCCCCTTCAGTCAAAGTGGCAATTGCCTCAAGCCGCTGGCCTTCTGCATTGCCGTCGCCATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/330142‑330293‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccAGGCCAGTGGAGCTGCGGGTGCTCTCGACCGTATAGCCCAACTGGCCGGCATCGTCGGCAGGCAGTACTGCGCTGTCTTCGATCTGTGTGGCGTCGAGTTCAAGGGGTTTGCCGTCGGCAGCCACTGCACCACCGCTGATGGCGACGG < NC_002947/330340‑330193 TCCCCTTCAGTCAAAGTGGCAATTGCCTCAAGCCGCTGGCCTTCTGCATTGCCGTCGCCATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGAT < 3:106930/149‑1TCCCCTTCAGTCAAAGTGGCAATTGCCTCAAGCCGCTGGCCTTCTGCATTGCCGTCGCCATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGAT > 4:77725/1‑149 CCCTTCAGTCAAAGTGGCAATTGCCTCAAGCCGCTGGCCTTCTGCATTGCCGTCGCCATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGC < 6:54235/149‑1 CCGTCGCCATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCC‑GGCCAGTGGAGCTGCGGGTGCTCTCGACCGTATAGCCCAACTGGCCG < 3:77725/148‑1 ATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCAGGCCAGTGGAGCTGCGGGTGCTCTCGACCGTATAGCCCAACTGGCCGGCATCGTC < 3:66951/149‑1 AAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCAGGCCAGTGGAGCTGCGGGTGCTCTCGACCGTATAGCCCAACTGGCCG > 7:1489/1‑111 AAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCAGGCCAGTGGAGCTGCGGGTGCTCTCGACCGTATAGCCCAACTGGCCG < 8:1489/111‑1 CAGGCCAGTGGAGCTGCGGGTGCTCTCGACCGTATAGCCCAACTGGCCGGCATCGTCGGCAGGCAGTACTGCGCTGTCTTCGATCTGTGTGGCGTCGAGTTCAAGGGGTTTGCCGTCGGCAGCCACTGCACCACCGCTGATGGCGACGG > 3:37617/1‑149 CAGGCCAGTGGAGCTGCGGGTGCTCTCGACCGTATAGCCCAACTGGCCGGCATCGTCGGCAGGCAGTACTGCGCTGTCTTCGATCTGTGTGGCGTCGAGTTCAAGGGGTTTGCCGTCGGCAGCCACTGCACCACCGCTGATGGCGACGG < 6:319331/149‑1 TCCCCTTCAGTCAAAGTGGCAATTGCCTCAAGCCGCTGGCCTTCTGCATTGCCGTCGCCATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/330142‑330293‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccAGGCCAGTGGAGCTGCGGGTGCTCTCGACCGTATAGCCCAACTGGCCGGCATCGTCGGCAGGCAGTACTGCGCTGTCTTCGATCTGTGTGGCGTCGAGTTCAAGGGGTTTGCCGTCGGCAGCCACTGCACCACCGCTGATGGCGACGG < NC_002947/330340‑330193 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |