New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 330293 | 54 (1.050) | 4 (0.080) | 3/252 | NT | 8.6% | coding (183/2298 nt) | PP_0272 | ferric siderophore receptor |
? | NC_002947 | = 330340 | 33 (0.660) | coding (230/2298 nt) | PP_0272 | ferric siderophore receptor |
CCGTCGCCATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCATTGGAAACCGCCCCAGGCGTAACGGCCAACAAGTCCGAGGTGGGTGGGCGCACCGA > NC_002947/330193‑330487 | ccGTCGCCATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGTCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCActggcct < 7:87227/148‑1 (MQ=255) ccGTCGCCATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTg < 6:319331‑M2/149‑2 (MQ=255) ccGTCGCCATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTg > 3:37617‑M2/1‑148 (MQ=255) cGCCATCATCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATTCGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCAc < 7:125816/149‑1 (MQ=255) ccATCAGCGGTGGTGCAGTGGCTGCCGCCGGCAAACCCCTTGAACTCGCCGCCACACACATCGAAGCCAGCGCAGTTCTGCCGGCCGACGATGCGGGGCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACt < 5:271684/148‑1 (MQ=255) ccATCAGCGGTGGTGCAGTGGCTCCCGACTGAAAACCCCTTGAACTCGACCCCACACAGATCTAAGACAGCCCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGAACCCGCAGCTCCACTGGCCGGGCAcg > 6:271684/1‑147 (MQ=255) cATCCGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGa < 6:148843/149‑1 (MQ=255) cATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACAGAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGa < 6:272530/149‑1 (MQ=255) cATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGa < 2:180364/149‑1 (MQ=255) cATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGa > 4:195549/1‑149 (MQ=255) ggtggtGCAGTGGCTGAAGACGGAAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGACTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACg > 4:244525/1‑149 (MQ=255) tGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCaa > 3:162358/1‑148 (MQ=255) ccGACGGCTAACCCCTTGAACGCGACGCCACACACCTCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGGAATc < 8:294250/148‑1 (MQ=255) aaaCCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTaccac < 2:236472/149‑1 (MQ=255) tccccATGACCTCGACGCCACACAGTTCGACGCCCGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTAccacca < 8:247754/148‑1 (MQ=255) cccTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGTTTACCACCATc < 4:162358/149‑1 (MQ=255) ccTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCg > 8:38300/1‑130 (MQ=255) ccTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCg < 7:38300/130‑1 (MQ=255) ccTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCa < 5:250280/149‑1 (MQ=255) cTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCAc > 7:114521/1‑149 (MQ=255) ttGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCCCTGACGCCGCGGCAGACACCGCAATCGGTTACCACCATCAcc > 6:254166/1‑149 (MQ=255) gAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCAccc < 5:319331/148‑1 (MQ=255) tCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCcag > 3:45945/1‑149 (MQ=255) cGCCACACAGATCTAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAga < 4:143461/149‑1 (MQ=255) gCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAgat < 8:179128/149‑1 (MQ=255) cacaGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAgatggat < 3:195549/149‑1 (MQ=255) acaGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAgatggatg < 6:309286/149‑1 (MQ=255) acaGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAgatggat > 7:7895/1‑148 (MQ=255) tCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACcg < 8:114521/148‑1 (MQ=255) gAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGa > 1:312442/1‑149 (MQ=255) aaGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGa > 2:310661/1‑148 (MQ=255) cAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATcc < 2:312442/149‑1 (MQ=255) gcAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCacac < 4:45945/149‑1 (MQ=255) gcAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCacac > 3:219230/1‑149 (MQ=255) gacgaTGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTggcatcgtcggcaggcagtactgcgctgtcttcgatctgtgtggcgtcgagttcaaggggtttgccgtcggcagccactgcaccaccgctgat < 3:66951‑M2/149‑94 (MQ=255) gacgaTGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCAtt > 7:257516/1‑149 (MQ=255) cGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCgcatcgtcggcaggcagtactgcgctgtcttcgatctgtgtggcgtcgagttcaaggggtttgccgtcggcagccactgcaccaccgctgatggcgacgg < 3:77725‑M2/148‑101 (MQ=255) cGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTggcatcgtcggcaggcagtactgcgctgtcttcgatctgtgtggcgtcgagttcaaggggttt > 7:1489‑M2/1‑48 (MQ=255) cGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTggcatcgtcggcaggcagtactgcgctgtcttcgatctgtgtggcgtcgagttcaaggggttt < 8:1489‑M2/111‑64 (MQ=255) ggCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCATTGGAAACCGc < 1:133047/149‑1 (MQ=255) taCGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCATTGGAAACCGCCCCAGGCGTAACgg > 2:57360/1‑149 (MQ=255) tCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCATTGGAAACCGCCCCAGGCGTAACGGCcaac < 3:244525/149‑1 (MQ=255) gagaGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCATTGGAAACCGCCCCAGGCGTAACGGCcaacaa < 8:7895/149‑1 (MQ=255) gCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCATTGGAAACCGCCCCAGGCGTAACGGCCAACAAGTCCGAggtg > 7:235508/1‑149 (MQ=255) cTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCATTGGAAACCGCCCCAGGCGTAACGGCCAACAAGTCCGAggtgggtg < 8:257516/149‑1 (MQ=255) cACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCATTGGAAACCGTCCCAGGCGTAACGGCCAACAAGTCCGAGgtgggtgg < 4:219230/147‑1 (MQ=255) cACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCATTGGAAACCGCCCCAGGCGTAACGGCCAACAAGTCCGAGGtgggtggg < 1:57360/148‑1 (MQ=255) ctggcACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCATTGGAAACCGCCCCAGGCGTAACGGCCAACAAGTCCGAGGTGGGTGGGCGCACCGa > 2:137624/1‑149 (MQ=255) | CCGTCGCCATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCATTGGAAACCGCCCCAGGCGTAACGGCCAACAAGTCCGAGGTGGGTGGGCGCACCGA > NC_002947/330193‑330487 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |