New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 33029354 (1.050)4 (0.080) 3/252 NT 8.6% coding (183/2298 nt) PP_0272 ferric siderophore receptor
?NC_002947 = 330340 33 (0.660)coding (230/2298 nt) PP_0272 ferric siderophore receptor

CCGTCGCCATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCATTGGAAACCGCCCCAGGCGTAACGGCCAACAAGTCCGAGGTGGGTGGGCGCACCGA  >  NC_002947/330193‑330487
                                                                                                                                                   |                                                                                                                                                   
ccGTCGCCATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGTCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCActggcct                                                                                                                                                     <  7:87227/148‑1 (MQ=255)
ccGTCGCCATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTg                                                                                                                                                    <  6:319331‑M2/149‑2 (MQ=255)
ccGTCGCCATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTg                                                                                                                                                    >  3:37617‑M2/1‑148 (MQ=255)
    cGCCATCATCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATTCGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCAc                                                                                                                                                <  7:125816/149‑1 (MQ=255)
      ccATCAGCGGTGGTGCAGTGGCTGCCGCCGGCAAACCCCTTGAACTCGCCGCCACACACATCGAAGCCAGCGCAGTTCTGCCGGCCGACGATGCGGGGCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACt                                                                                                                                               <  5:271684/148‑1 (MQ=255)
      ccATCAGCGGTGGTGCAGTGGCTCCCGACTGAAAACCCCTTGAACTCGACCCCACACAGATCTAAGACAGCCCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGAACCCGCAGCTCCACTGGCCGGGCAcg                                                                                                                                               >  6:271684/1‑147 (MQ=255)
       cATCCGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGa                                                                                                                                             <  6:148843/149‑1 (MQ=255)
       cATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACAGAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGa                                                                                                                                             <  6:272530/149‑1 (MQ=255)
       cATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGa                                                                                                                                             <  2:180364/149‑1 (MQ=255)
       cATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGa                                                                                                                                             >  4:195549/1‑149 (MQ=255)
              ggtggtGCAGTGGCTGAAGACGGAAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGACTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACg                                                                                                                                      >  4:244525/1‑149 (MQ=255)
                            tGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCaa                                                                                                                         >  3:162358/1‑148 (MQ=255)
                              ccGACGGCTAACCCCTTGAACGCGACGCCACACACCTCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGGAATc                                                                                                                       <  8:294250/148‑1 (MQ=255)
                                      aaaCCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTaccac                                                                                                              <  2:236472/149‑1 (MQ=255)
                                        tccccATGACCTCGACGCCACACAGTTCGACGCCCGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTAccacca                                                                                                            <  8:247754/148‑1 (MQ=255)
                                          cccTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGTTTACCACCATc                                                                                                          <  4:162358/149‑1 (MQ=255)
                                           ccTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCg                                                                                                                            >  8:38300/1‑130 (MQ=255)
                                           ccTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCg                                                                                                                            <  7:38300/130‑1 (MQ=255)
                                           ccTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCa                                                                                                         <  5:250280/149‑1 (MQ=255)
                                            cTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCAc                                                                                                        >  7:114521/1‑149 (MQ=255)
                                             ttGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCCCTGACGCCGCGGCAGACACCGCAATCGGTTACCACCATCAcc                                                                                                       >  6:254166/1‑149 (MQ=255)
                                               gAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCAccc                                                                                                      <  5:319331/148‑1 (MQ=255)
                                                   tCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCcag                                                                                                 >  3:45945/1‑149 (MQ=255)
                                                       cGCCACACAGATCTAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAga                                                                                             <  4:143461/149‑1 (MQ=255)
                                                        gCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAgat                                                                                            <  8:179128/149‑1 (MQ=255)
                                                            cacaGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAgatggat                                                                                        <  3:195549/149‑1 (MQ=255)
                                                             acaGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAgatggatg                                                                                       <  6:309286/149‑1 (MQ=255)
                                                             acaGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAgatggat                                                                                        >  7:7895/1‑148 (MQ=255)
                                                                  tCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACcg                                                                                   <  8:114521/148‑1 (MQ=255)
                                                                    gAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGa                                                                                >  1:312442/1‑149 (MQ=255)
                                                                     aaGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGa                                                                                >  2:310661/1‑148 (MQ=255)
                                                                         cAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATcc                                                                           <  2:312442/149‑1 (MQ=255)
                                                                             gcAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCacac                                                                       <  4:45945/149‑1 (MQ=255)
                                                                             gcAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCacac                                                                       >  3:219230/1‑149 (MQ=255)
                                                                                            gacgaTGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTggcatcgtcggcaggcagtactgcgctgtcttcgatctgtgtggcgtcgagttcaaggggtttgccgtcggcagccactgcaccaccgctgat                                                        <  3:66951‑M2/149‑94 (MQ=255)
                                                                                            gacgaTGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCAtt                                                        >  7:257516/1‑149 (MQ=255)
                                                                                                    cGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCgcatcgtcggcaggcagtactgcgctgtcttcgatctgtgtggcgtcgagttcaaggggtttgccgtcggcagccactgcaccaccgctgatggcgacgg                                                  <  3:77725‑M2/148‑101 (MQ=255)
                                                                                                    cGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTggcatcgtcggcaggcagtactgcgctgtcttcgatctgtgtggcgtcgagttcaaggggttt                                                                                      >  7:1489‑M2/1‑48 (MQ=255)
                                                                                                    cGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTggcatcgtcggcaggcagtactgcgctgtcttcgatctgtgtggcgtcgagttcaaggggttt                                                                                      <  8:1489‑M2/111‑64 (MQ=255)
                                                                                                     ggCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCATTGGAAACCGc                                               <  1:133047/149‑1 (MQ=255)
                                                                                                                   taCGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCATTGGAAACCGCCCCAGGCGTAACgg                                 >  2:57360/1‑149 (MQ=255)
                                                                                                                        tCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCATTGGAAACCGCCCCAGGCGTAACGGCcaac                            <  3:244525/149‑1 (MQ=255)
                                                                                                                          gagaGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCATTGGAAACCGCCCCAGGCGTAACGGCcaacaa                          <  8:7895/149‑1 (MQ=255)
                                                                                                                                    gCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCATTGGAAACCGCCCCAGGCGTAACGGCCAACAAGTCCGAggtg                >  7:235508/1‑149 (MQ=255)
                                                                                                                                        cTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCATTGGAAACCGCCCCAGGCGTAACGGCCAACAAGTCCGAggtgggtg            <  8:257516/149‑1 (MQ=255)
                                                                                                                                           cACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCATTGGAAACCGTCCCAGGCGTAACGGCCAACAAGTCCGAGgtgggtgg           <  4:219230/147‑1 (MQ=255)
                                                                                                                                           cACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCATTGGAAACCGCCCCAGGCGTAACGGCCAACAAGTCCGAGGtgggtggg          <  1:57360/148‑1 (MQ=255)
                                                                                                                                                  ctggcACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCATTGGAAACCGCCCCAGGCGTAACGGCCAACAAGTCCGAGGTGGGTGGGCGCACCGa  >  2:137624/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
CCGTCGCCATCAGCGGTGGTGCAGTGGCTGCCGACGGCAAACCCCTTGAACTCGACGCCACACAGATCGAAGACAGCGCAGTACTGCCTGCCGACGATGCCGGCCAGTTGGGCTATACGGTCGAGAGCACCCGCAGCTCCACTGGCCTGGCACTGACGCCACGGCAGACACCGCAATCGGTTACCACCATCACCCGCCAGCAGATGGATGACCGCGACATCCACACCATCGAGCAGGCATTGGAAACCGCCCCAGGCGTAACGGCCAACAAGTCCGAGGTGGGTGGGCGCACCGA  >  NC_002947/330193‑330487

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.