New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	379770 =	44 (0.850)	4 (0.080)	4/248	NT	8.3%	coding (67/1107 nt)	gbcB	glycine‑betaine dioxygenase subunit
	?	NC_002947	379814 =	47 (0.950)					coding (111/1107 nt)	gbcB	glycine‑betaine dioxygenase subunit

AGATGGTGTAGGACCGCATCACGGGCTTGCCTTCGATCTCCAGCTCCAGGGTAACGAACTGCCCTGGCTTGAAGAAGAACATGATCGGCTGGTCGGCCATGAAGCAGAAGGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/379923‑379770 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcacCTTCTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCAT  >  NC_002947/379814‑379921                                                                                                                                                                                                                                                                        AGATGGTGTAGGACCGCATCACGGGCTTGCCTTCGATCTCCAGCTCCAGGGTAACGAACTGCCCTGGCTTGAAGAAGAACATGATCGGCTGGTCGGCCATGAAGCAGAAGGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAG                                                                                                                   <  3:91089/149‑1  GATGGTGTAGGACCGCATCACGGGCTTGCCTTCGATCTCCAGCTCCAGGGTAACGAACTGCCCTGGCTTGAAGAAGAACATGATCGGCTGGTCGGCCATGAAGCAGAAGGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGC                                                                                                                  <  8:30295/149‑1            GACCGCATCACGGGCTTGCCTTCGATCTCCAGCTCCAGGGTAACGAACTGCCCTGGCTTGAAGAAGAACATGATCGGCTGGTCGGCCATGAAGCAGAAGGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGC                                                                                                                  <  1:175911/139‑1            GACCGCATCACGGGCTTGCCTTCGATCTCCAGCTCCAGGGTAACGAACTGCCCTGGCTTGAAGAAGAACATGATCGGCTGGTCGGCCATGAAGCAGAAGGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGC                                                                                                                  >  2:175911/1‑139                                                                                                          AGAAGGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCACCTTCTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCC          >  1:240097/1‑149                                                                                                           GAAGGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCACCTTCTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGC               >  7:90520/1‑143                                                                                                           GAAGGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCACCTTCTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGC               <  8:90520/143‑1                                                                                                                  CGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCACCTTCTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCAT  <  2:240097/149‑1                                                                                                                                                                                                                                                                        AGATGGTGTAGGACCGCATCACGGGCTTGCCTTCGATCTCCAGCTCCAGGGTAACGAACTGCCCTGGCTTGAAGAAGAACATGATCGGCTGGTCGGCCATGAAGCAGAAGGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/379923‑379770 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcacCTTCTGCTTCATGGCCGACCAGCCGATCATGTTCTTCTTCAAGCCAGGGCAGTTCGTTACCCTGGAGCTGGAGATCGAAGGCAAGCCCGTGATGCGGTCCTACACCAT  >  NC_002947/379814‑379921

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.