New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 577883 = | 39 (0.760) | 4 (0.080) | 4/250 | NT | 9.2% | coding (2920/3069 nt) | fdoG | formate dehydrogenase‑O major subunit |
? | NC_002947 | 577910 = | 41 (0.830) | coding (2947/3069 nt) | fdoG | formate dehydrogenase‑O major subunit |
ATCAGAGTTTCTCCACTTTCACGAGGAACGACTTGGACTCTGGCGTCTGCGTGTTGCCGTCACCGAGGAACGGCACCAAGGTATTGGTCAGGTAGCCATGCCGGGTAGCGCCGGTGAAGCCCCAGTGCAGCGGAATGCCGATCTGGTGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/578033‑577883 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcacTGGGGCTTCACCGGCGCTACCCGGCATGGCTACCTGACCAATACCTTGGTGCCGTTCCTCGGTGACGGCAACACGCAGACGCCAGAGTCCAAGTCGTTCCTCGTGAAAGTGGAGAAACTCTGATGGCCAGCCAAGACATCATCGCCCG > NC_002947/577910‑578057 ATCAGAGTTTCTCCACTTTCACGAGGAACGACTTGGACTCTGGCGTCTGCGTGTTGCCGTCACCGAGGAACGGCACCAAGGTATTGGTCAGGTAGCCATGCCGGGTAGCGCCGGTGAAGCCCCAGTGCAGCGGAATGCCGATCTGGTG > 1:43630/1‑148 TTTCACGAGGAACGACTTGGACTCTGGCGTCTGCGTGTTGCCGTCACCGAGGAACGGCACCAAGGTATTGGTCAGGTAGCCATGCCGGGTAGCGCCGGTGAAGCCCCAGTGCAGCGGAATGCCGATCTGGTG > 5:43937/1‑132 TTTCACGAGGAACGACTTGGACTCTGGCGTCTGCGTGTTGCCGTCACCGAGGAACGGCACCAAGGTATTGGTCAGGTAGCCATGCCGGGTAGCGCCGGTGAAGCCCCAGTGCAGCGGAATGCCGATCTGGTG < 6:43937/132‑1 CAGTGCAGCGGAATGCCGATCTGGTGCACTGGGGCTTCACCGGCGCTACCCGGCATGGCTACCTGACCAATACCTTGGTGCCGTTCCTCGGTGA < 5:147617/94‑1 CAGTGCAGCGGAATGCCGATCTGGTGCACTGGGGCTTCACCGGCGCTACCCGGCATGGCTACCTGACCAATACCTTGGTGCCGTTCCTCGGTGA > 6:147617/1‑94 AGTGCAGCGGAATGCCGATCTGGTGCACTGGGGCTTCACCGGCGCTACCCGGCATGGCTACCTGACCAATACCTTGGTGCCGTTCCTCGGTGACGGCAACACGCAGACGCCA > 5:110985/1‑112 AGTGCAGCGGAATGCCGATCTGGTGCACTGGGGCTTCACCGGCGCTACCCGGCATGGCTACCTGACCAATACCTTGGTGCCGTTCCTCGGTGACGGCAACACGCAGACGCCA < 6:110985/112‑1 CACTGGGGCTTCACCGGCGCTACCCGGCATGGATACCTGACCAATACCTTGGTGCCGTTCCTCGGTGACGGCAACACGCAGACGCCAGAGTCCAAGTCGTTCCTCGTGAAAGTGGAGAAACTCTGATGGCCAGCCAAGACATCATCGCC > 1:207568/1‑149 CTGGGGCTTCACCGGCGCTACCCGGCATGGCTACCTGACCAATACCTTGGTGCCGTTCCTCGGTGACGGCAACACGCAGACGCCAGAGTCCAAGTCGTTCCTCGTGAAAGTGGAGAAACTCTGATGGCCAGCCAAGACATCATCGCCCG > 1:46718/1‑149 ATCAGAGTTTCTCCACTTTCACGAGGAACGACTTGGACTCTGGCGTCTGCGTGTTGCCGTCACCGAGGAACGGCACCAAGGTATTGGTCAGGTAGCCATGCCGGGTAGCGCCGGTGAAGCCCCAGTGCAGCGGAATGCCGATCTGGTGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/578033‑577883 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcacTGGGGCTTCACCGGCGCTACCCGGCATGGCTACCTGACCAATACCTTGGTGCCGTTCCTCGGTGACGGCAACACGCAGACGCCAGAGTCCAAGTCGTTCCTCGTGAAAGTGGAGAAACTCTGATGGCCAGCCAAGACATCATCGCCCG > NC_002947/577910‑578057 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |