New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 610297 | 41 (0.790) | 3 (0.060) | 3/246 | NT | 6.8% | coding (549/1926 nt) | PP_0525 | B12 family TonB‑dependent receptor |
? | NC_002947 | = 610328 | 43 (0.880) | coding (518/1926 nt) | PP_0525 | B12 family TonB‑dependent receptor |
ATGGCCCGGTCGAGTCGATACCGGCAGTTTCATCCAGGCTGGCGCCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCCATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/610143‑610297 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccattgGCGGGGTGATCCAGATCTTCACCCGACGCAGCAATGGCC < NC_002947/610328‑610290 agGGCCCGGTCGAGTCGCTACCGGCAGTTTCATCCAGGCTGGCGCCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCCATGCGCAGGCGTGGCTGCAGGCCGGGG < 6:229472/147‑1 GGCCCGGTCGAGTCGATACCGGCAGTTTCATCCAGGCTGGCGCCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCCATGCGCAGGCGTGGCTGCAGGCCGGGGC > 2:212851/1‑148 CCCGGTCGAGTCGATACCGGCAGTTTCATCCAGGCTGGCGCCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCCATGCGCAGGCGTGGCTGCAGGCCGGGGCCAT > 8:160577/1‑149 CCCGGTCGAGTCGATACCGGCAGTTTCATCCAGGCTGGCGCCAAGGTTGAAGAGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCCATGCGCAGGCGTGGCTGCAGGCCGGGGCCAT > 8:227207/1‑149 CCGGTCGAGTCGATACCGGCAGTTTCATCCAGGCTGGCGCCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCCATGCGCAGGCGTGGCTGCAGGCCGGGGCCATT > 1:272192/1‑149 CGGTCGAGTCGATACCGGCAGTTTCATCCAGGCTGGCGCCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCCATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTG < 5:5234/149‑1 CAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCCATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGGCGGGGTGATCCAGATCTTCACCCGACGCAGCAATGGCC < 6:107176/149‑1 GTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCCATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGGCGGGGTGATCCAGATCTTCACCCGACGCAGCAATGGC > 5:27775/1‑144 GTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCCATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGGCGGGGTGATCCAGATCTTCACCCGACGCAGCAATGGC < 6:27775/144‑1 ATGGCCCGGTCGAGTCGATACCGGCAGTTTCATCCAGGCTGGCGCCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCCATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/610143‑610297 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccattgGCGGGGTGATCCAGATCTTCACCCGACGCAGCAATGGCC < NC_002947/610328‑610290 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |