New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 610297 | 41 (0.790) | 3 (0.060) | 3/246 | NT | 6.8% | coding (549/1926 nt) | PP_0525 | B12 family TonB‑dependent receptor |
? | NC_002947 | = 610328 | 43 (0.880) | coding (518/1926 nt) | PP_0525 | B12 family TonB‑dependent receptor |
CGGTCGAGTCGATACCGGCAGTTTCATCCAGGCTGGCGCCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTGGTCGATGTCCAGAAACTGCAGGCCGCTGTCGCCCGAAGTGGCATTGGCGAT > NC_002947/610149‑610443 | cGGTCGAGTCGATACCGGCAGTTTCATCCAGGCTGGCGCCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTG < 5:5234‑M1/149‑1 (MQ=255) gagtcgaTACCGGCAGTTTCATCCAGGCTGGCGCCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATtgctgc < 8:86868/148‑1 (MQ=255) gtcgaTACCGGCAGTTTCATCCAGGCTGGCGCCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGACATTGATGCGTc > 6:319083/1‑149 (MQ=255) gaTACCGGCAGTTTCATCCAGGCTGGCGCCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGt < 5:128173/145‑1 (MQ=255) gaTACCGGCAGTTTCATCCAGGCTGGCGCCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGt > 6:128173/1‑145 (MQ=255) ccGGCAGTTTCATCCAGGCTGGCGCCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGaa < 7:227207/149‑1 (MQ=255) cGGCAGTTTCATCCAGGCTGGCGCCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAg < 6:153493/149‑1 (MQ=255) cGGCAGTTTCATCCAGGCTGGCGCCAAGGTTGAAGCGGGGCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCCTATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGaa < 1:73760/149‑1 (MQ=255) tttCATCCAGGCTGGCGCCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTg > 6:230555/1‑148 (MQ=255) cATCCAGGCTGGCGCCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGAt < 5:144409/148‑1 (MQ=255) cAGGCTGGCGCCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCAccc > 4:24857/1‑149 (MQ=255) aGGCTGGCGCCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCgg < 6:196517/129‑1 (MQ=255) aGGCTGGCGCCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCgg > 5:196517/1‑129 (MQ=255) gcCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATtgct < 8:230087/114‑1 (MQ=255) gcCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATtgct > 7:230087/1‑114 (MQ=255) cAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGgcggggtgatccagatcttcacccgacgcagcaatggcc < 6:107176‑M1/149‑40 (MQ=255) ggTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCg < 6:194637/149‑1 (MQ=255) gTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGgcggggtgatccagatcttcacccgacgcagcaatggc > 5:27775‑M1/1‑106 (MQ=255) gTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGgcggggtgatccagatcttcacccgacgcagcaatggc < 6:27775‑M1/144‑39 (MQ=255) ttGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCt > 1:21321/1‑149 (MQ=255) aGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCg < 1:170852/149‑1 (MQ=255) gTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTc < 6:313062/137‑1 (MQ=255) gTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTc > 5:313062/1‑137 (MQ=255) tggTTGCCGCCAGAAAGCGCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGTCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGa < 5:319083/147‑1 (MQ=255) tCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGa < 1:212851/149‑1 (MQ=255) tCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGa < 2:18741/149‑1 (MQ=255) tCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGa < 4:166293/149‑1 (MQ=255) tCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGa < 5:230555/149‑1 (MQ=255) gccgccAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAgcgc < 6:48770/148‑1 (MQ=255) ccgccAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGa < 2:272192/149‑1 (MQ=255) cAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCcg > 5:304184/1‑149 (MQ=255) cccAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCg < 5:32723/127‑1 (MQ=255) cccAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCg > 6:32723/1‑127 (MQ=255) cTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGAt < 3:24857/149‑1 (MQ=255) ggcggcC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTGGTCGATGTCCAGa > 7:22006/1‑148 (MQ=255) c‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTGGTCGATGTCCAGAAACTGCa < 8:19303/149‑1 (MQ=255) c‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTGGTCGATGTCCAGAAACTGCa < 7:105999/149‑1 (MQ=255) gcAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTGGTCGATGTCCAGAAACTGCAGGCCg > 5:283204/1‑149 (MQ=255) gCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTGGTCGATGTCCAGAAACTGCAGGCCGCTGt < 2:21321/149‑1 (MQ=255) gTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTGGTCGATGTCCAGAAACTGCAGGCCGCTGTCg > 1:54450/1‑149 (MQ=255) cAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTGGTCGATGTCCAGAAACTGCAGGCCGCTGTCGCCCGAAg > 7:77630/1‑149 (MQ=255) aGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTGGTCGATGTCCAGAAACTGCAgg < 4:153167/132‑1 (MQ=255) aGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTGGTCGATGTCCAGAAACTGCAgg > 3:153167/1‑132 (MQ=255) gCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTg > 8:203229/1‑108 (MQ=255) gCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTg < 7:203229/108‑1 (MQ=255) gCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTGGTCGATGTCCAGAAACTGCAGGCCGCTGTCGCCCGGAGTgg < 7:88465/149‑1 (MQ=255) gCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTGGTCGATGTCCAGAAACTGCAGGCCGCTGTCGCCCGAAGTgg < 8:22006/149‑1 (MQ=255) ggggCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTGGTCGATGTCCAGAAACTGCAGGCCGCTGTCGCCCGAAGTGGCAt < 8:77630/149‑1 (MQ=255) gtgcgaTTGCTGCGTCGTGTGAAGTTCTGTATCAGACCTCCTATGGGTTCGCTTCCTTATAACGCTGAGCGCGTGCCGCGCAGGACTTCGATGCTCTCGATCTGGTCGATGTCCAGAAACTGCAGGCCGCTGTCGCCCGAATTGGCAtt < 3:244327/144‑1 (MQ=255) ggCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCcaatggccccggcctgcagccacgcctgcgcatggccgccggcagcaaccagacattccaacgcagcctggggctttctggcggcaacgactcgacccgcttcaaccttg < 6:107176‑M2/149‑111 (MQ=255) gCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCcaatggccccggcctgcagccacgcctgcgcatggccgccggcagcaaccagacattccaacgcagcctggggctttctggcggcaacgactcgacccgcttcaac < 6:27775‑M2/144‑107 (MQ=255) gCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCcaatggccccggcctgcagccacgcctgcgcatggccgccggcagcaaccagacattccaacgcagcctggggctttctggcggcaacgactcgacccgcttcaac > 5:27775‑M2/1‑38 (MQ=255) cATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTgg > 1:33587/1‑101 (MQ=255) cATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTgg < 2:33587/101‑1 (MQ=255) cATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTGGTCGATGTCCAGAAACTGCAGGCCGCTGTCGCCCGAAGTGGCATTGGc > 7:12239/1‑148 (MQ=255) aTTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTGGTCGATGTCCAGAAACTGCAGGCCGCTGTCGCCCGAAGTGGCATTGGCGa > 8:16435/1‑149 (MQ=255) aTTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCACTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTGGTCGATGTCCAGAAACTGCAGGCCGCTGTCGCCCGAAGTGGCATTGGCGa > 3:312975/1‑149 (MQ=255) ttGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTGGTCGATGTCCAGAAACTGCAGGCCGCTGTCGCCCGAAGTGGCATTGGCGAt > 1:208929/1‑149 (MQ=255) ttGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTGGTCGATGTCCAGAAACTGCAGGCCGCTGTCGCCCGAAGTGGCATTGGCGAt < 2:208929/149‑1 (MQ=255) ttGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTGGTCGATGTCCAGAAACTGCAGGCCGCTGTCGCCCGAAGTGGCATTGGCGAt > 6:326311/1‑149 (MQ=255) | CGGTCGAGTCGATACCGGCAGTTTCATCCAGGCTGGCGCCAAGGTTGAAGCGGGTCGAGTCGTTGCCGCCAGAAAGCCCCAGGCTGCGTTGGAATGTCTGGTTGCTGCCGGCGGCC‑ATGCGCAGGCGTGGCTGCAGGCCGGGGCCATTGCTGCGTCGGGTGAAGATCTGGATCACCCCGCCAATGGCATCGCTTCCGTATACCGCTGAGCGCGAGCCGCGCAGGACTTCGATGCGCTCGATCTGGTCGATGTCCAGAAACTGCAGGCCGCTGTCGCCCGAAGTGGCATTGGCGAT > NC_002947/610149‑610443 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |