| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 810546 = | 48 (0.930) | 3 (0.060) | 3/252 | NT | 6.0% | coding (241/456 nt) | rimI | ribosomal‑protein‑S18‑alanine N‑acetyltransferase |
| ? | NC_002947 | 810588 = | 47 (0.940) | coding (283/456 nt) | rimI | ribosomal‑protein‑S18‑alanine N‑acetyltransferase | |||||
ATAACGCTCGTACAAACGATAGGCCGACTGGTTGCTGGCGCGCACTTCCAGAAAGCATTCGCGGCCATTGAGCTGATAGGCCCGGGCCATCAGGTGCTTGAGCAGGCGCAGGCCCAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/810665‑810546‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccTATCAGCTCAATGGCCGCGAATGCTTTCTGGAAGTGCGCGCCAGCAACCAGTCGGCCTATCGTTTGTACGAGCGTTATGGTTTCAACGAAATTGGCCGCCGCCGCGACTATTATCCGATTGCCGGCGGCCGTGAAGACGCCCTGGT > NC_002947/810588‑810733 ATAACGCTCGTACAAACGATAGGCCGACTGGTTGCTGGCGCGCACTTCCAGAAAGCATTCGCGGCCATTGAGCTGATAGGCCCGGGCCATCAGGTGCTTGAGCAGGCGCAGGCCCAGGC > 5:35437/1‑119ATAACGCTCGTACAAACGATAGGCCGACTGGTTGCTGGCGCGCACTTCCAGAAAGCATTCGCGGCCATTGAGCTGATAGGCCCGGGCCATCAGGTGCTTGAGCAGGCGCAGGCCCAGGC < 6:35437/119‑1 ATAGGCCCGGGCCATCAGGTGCTTGAGCAGGCGCAGGCCCAGGCCTATCAGCTCAATGGCCGCGAATGCTTTCTGGAA < 7:2227/78‑1 ATAGGCCCGGGCCATCAGGTGCTTGAGCAGGCGCAGGCCCAGGCCTATCAGCTCAATGGCCGCGAATGCTTTCTGGAA > 8:2227/1‑78 TAGGCCCGGGCCATCAGGTGCTTGAGCAGGCGCAGGCCCAGGCCTATCAGCTCAATGGCCGCGAATGCTTTCTGGAAGTGCGCGCCAGCAACCAGTCGGCCTATCGTTTGTACGAGCGTTATGGTTTCAACGAAATTGGCCGCCGCCGC > 8:60012/1‑149 GGCCTATCAGCTCAATGGCCGCGAATGCTTTCTGGAAGTGCGCGCCAGCAACCAGTCGGCCTATCGTTTGTACGAGCGTTATGGTTTCAACGAAATTGGCCGCCGCCGCGACTATTATCCGATTGCCGGCGGCCGTGAAGACGCCCTGG > 2:326999/1‑149 GCCTATCAGCTCAATGGCCGCGAATGCTTTCTGGAAGTGCGCGCCAGCAACCAGTCGGCCTATCGTTTGTACGAGCGTTATGGTTTCAACGAAATTGGCCGCCGCCGCGACTATTATCCGATTGCCGGCGGCCGTGAAGACGCCCTGGT < 1:200227/149‑1 CTATCAGCTCAATGGCCGCGAATGCTTTCTGGAAGTGCGCGCCAGCAACCAGTCGGCCTATCGTTTGTACGAGCGTTATGGTTTCAACGAAATTGGCCGCCGCCGCGACTATTATCCGATTGCCGGCGGCCGTGAAGACGCCCTG > 3:199907/1‑145 CTATCAGCTCAATGGCCGCGAATGCTTTCTGGAAGTGCGCGCCAGCAACCAGTCGGCCTATCGTTTGTACGAGCGTTATGGTTTCAACGAAATTGGCCGCCGCCGCGACTATTATCCGATTGCCGGCGGCCGTGAAGACGCCCTG < 4:199907/145‑1 ATAACGCTCGTACAAACGATAGGCCGACTGGTTGCTGGCGCGCACTTCCAGAAAGCATTCGCGGCCATTGAGCTGATAGGCCCGGGCCATCAGGTGCTTGAGCAGGCGCAGGCCCAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/810665‑810546‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccTATCAGCTCAATGGCCGCGAATGCTTTCTGGAAGTGCGCGCCAGCAACCAGTCGGCCTATCGTTTGTACGAGCGTTATGGTTTCAACGAAATTGGCCGCCGCCGCGACTATTATCCGATTGCCGGCGGCCGTGAAGACGCCCTGGT > NC_002947/810588‑810733 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |