New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1401051 =	16 (0.310)	3 (0.060)	3/248	NT	14.5%	coding (46/648 nt)	queE	7‑carboxy‑7‑deazaguanine synthase
	?	NC_002947	1401099 =	20 (0.410)					coding (94/648 nt)	queE	7‑carboxy‑7‑deazaguanine synthase

TGAAGCCGGCCACTTGTTCGAGGATCGAATCAAGGGTGCGTACGGTACCGCCACTGAAGGCATAGGCACTGTCGCAGTACTGGCAACGCAGGGGGCAACCGGTGAGGCGCACAAATACCGTGGGCAGCCCGGCCGTTCGCGTCTCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1401198‑1401051 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcaccGGTTGCCCCCTGCGTTGCCAGTACTGCGACAGTGCCTATGCCTTCAGTGGCGGTACCGTACGCACCCTTGATTCGATCCTCGAACAAGTGGCCGGCTTCAAACCGCGCTACGTCTGTGTCACCGGTGGCGAACCACTGGCCCAGC  >  NC_002947/1401099‑1401243                                                                                                                                                                                                                                                                                                       TGAAGCCGGCCACTTGTTCGAGGATCGAATCAAGGGTGCGTACGGTACCGCCACTGAAGGCATAGGCACTGTCGCAGTACTGGCAACGCAGGGGGCAACCGGTGAGGCGCACAAATACCGTGGGCAGCCCGGCCGTTCGCGTCTCACC                                                                                                                                                   <  7:303075/148‑1                                                                                                    CGGTGAGGCGCACAAATACCGTGGGCAGCCCGGCCGTTCGCGTCTCACCGGTTGCCCCCTGCGTTGCCAGTACTGCGACAGTGCCTATGCCTTCAGTGGCGGTACCGTACGCACCCTTGATTCGATCCTCGAACAAGTGGCCGG                                                    >  7:195710/1‑144                                                                                                    CGGTGAGGCGCACAAATACCGTGGGCAGCCCGGCCGTTCGCGTCTCACCGGTTGCCCCCTGCGTTGCCAGTACTGCGACAGTGCCTATGCCTTCAGTGGCGGTACCGTACGCACCCTTGATTCGATCCTCGAACAAGTGGCCGG                                                    <  8:195710/144‑1                                                                                                     GGTGAGGCGCACAAATACCGTGGGCAGCCCGGCCGTTCGCGTCTCACCGGTTGCCCCCTGCGTTGCCAGTACTGCGACAGTGCCTATGCCTTCAGTGGCGGTACCGTACGCACCCTTGATTCGATCCTCGAACAAGTGGCCGGCTTCA                                               >  3:188483/1‑148                                                                                                                                                TCACCGGTTGCCCCCTGCGTTGCCAGTACTGCGACAGTGCCTATGCCTTCAGTGGCGGTACCGTACGCACCCTTGATTCGATCCTCGAATAAGTGGCCGGCTTCAAACCGCGCTACGTCTGTGTCACCGGTGGCGAACCACTGGCCCAG   >  6:281529/1‑149                                                                                                                                                 CACCGGTTGCCCCCTGCGTTGCCAGTACTGCGACAGTGCCTATGCCTTCAGTGGCGGTACCGTACGCACCCTTGATTCGATCCTCGAACAAGTGGCCGGCTTCAAACCGCGCTACGTCTGTGTCACCGGTGGCGAACCACTGGCCCAGC  >  5:86552/1‑149                                                                                                                                                  ACCGGTTGCCCCCTGCGTTGCCAGTACTGCGACAGTGCCTATGCCTTCAGTGGCGGTACCGTACGCACCCTTGATTCGATCCTCGAACAAGTGGCCGGCTTCAAACCGCG                                        >  8:152106/1‑110                                                                                                                                                                                                                                                                                                       TGAAGCCGGCCACTTGTTCGAGGATCGAATCAAGGGTGCGTACGGTACCGCCACTGAAGGCATAGGCACTGTCGCAGTACTGGCAACGCAGGGGGCAACCGGTGAGGCGCACAAATACCGTGGGCAGCCCGGCCGTTCGCGTCTCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1401198‑1401051 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcaccGGTTGCCCCCTGCGTTGCCAGTACTGCGACAGTGCCTATGCCTTCAGTGGCGGTACCGTACGCACCCTTGATTCGATCCTCGAACAAGTGGCCGGCTTCAAACCGCGCTACGTCTGTGTCACCGGTGGCGAACCACTGGCCCAGC  >  NC_002947/1401099‑1401243

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.