New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1607270 | 49 (0.950) | 3 (0.060) | 3/246 | NT | 5.9% | coding (264/888 nt) | PP_1408 | (R)‑3‑hydroxydecanoyl‑ACP:CoA transacylase |
? | NC_002947 | = 1607299 | 49 (1.000) | coding (235/888 nt) | PP_1408 | (R)‑3‑hydroxydecanoyl‑ACP:CoA transacylase |
GATAGTCGCGCATCGGCTCGTTGATCACTGGCGAGAACGAACTCACCACTGCCTTCTTCACGTACCGCGGCTGGTGCGCCAGCGCCAGCAGCGTGCTTGCGCCACCCCACGAAAAAGACATCACGTGGTCTGCCTGGAAGTGCTCGATCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1607119‑1607270 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcagcAAGGAGACCGAGGCGCATATCCTCCTTGAGCTGATCGAGCACTTCCAGGCAGACCACGTGATGTCTTTTTCGTGGGGTGGCGCAAGCACGCTGCTGGCGCTGGCGCACCAGCCGCGGTACGTGAAGAAGGCAGTGGTGAGTTCGTTC < NC_002947/1607299‑1607153 GATAGTCGCGCATCGGCTCGTTGATCACTGGCGAGAACGAACTCACCACTGCCTTCTTCACGTACCGCGGCTGGTGCGCCAGCGCCAGCAGCGTGCTTGCGCCACCCCACGAAAAAGACATCACGTGGTCTGCCTGGAAGTGCTCGAT > 7:259399/1‑148 TAGTCGCGCATCGGCTCGTTGATCACTGGCGAGAACGAACTCACCACTGCCTTCTTCACGTACCGCGGCTGGTGCGCCAGCGCCAGCAGCGTGCTTGCGCCACCCCACGAAAAAGACATCACGTGGTCTGCCTGGAAGTGCTCGATCA < 2:330299/148‑1 CTCACCACTGCCTTCTTCACGTACCGCGGCTGGTGCGCCAGCGCCAGCAGCGTGCTTTCGCCACCCCACGAAAAAGACATCACGTTGTCTGCCTTGAAGTGCTCGATCAGGAAGGAGACCGAGGCGCATATCCTCCTTGAGCTGATCGA < 8:11330/149‑1 ACCACTGCCTTCTTCACGTACCGCGGCTGGTGCGCCAGCGCCAGCAGCGTGCTTGCGCCACCCCACGAAAAAGACATCACGTGGTCTGCCTGGAAGTGCTCGATCAGCAAGGAGACCGAGGCGCATATCCTCCTTGAGCTGATCGAGCA < 4:238032/149‑1 ACCACTGCCTTCTTCACGTACCGCGGCTGGTGCGCCAGCGCCAGCAGCGTGCTTGCGCCACCCCACGAAAAAGACATCACGTGGTCTGCCTGGAAGTGCTCGATCAGCAAGGAGACCGAGGCGCATATCCTCCTTGAGCTGATCGAGC < 3:192545/148‑1 GCAAGGAGACCGAGGCGCATATCCTCCTTGAGCTGATCGAGCACTTCCAGGCAGACCACGTGATGTCTTTTTCGTGGGGTGGCGCAAGCACGCTGCTGGCGCTGGCGCACCAGCCGCGGTACGTGAAGAAGGCAGTGGTGAGTTCGTTC > 2:201095/1‑149 GATAGTCGCGCATCGGCTCGTTGATCACTGGCGAGAACGAACTCACCACTGCCTTCTTCACGTACCGCGGCTGGTGCGCCAGCGCCAGCAGCGTGCTTGCGCCACCCCACGAAAAAGACATCACGTGGTCTGCCTGGAAGTGCTCGATCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1607119‑1607270 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcagcAAGGAGACCGAGGCGCATATCCTCCTTGAGCTGATCGAGCACTTCCAGGCAGACCACGTGATGTCTTTTTCGTGGGGTGGCGCAAGCACGCTGCTGGCGCTGGCGCACCAGCCGCGGTACGTGAAGAAGGCAGTGGTGAGTTCGTTC < NC_002947/1607299‑1607153 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |