New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1656936 = | 60 (1.160) | 4 (0.080) | 4/250 | NT | 6.9% | coding (1558/1698 nt) | PP_1450 | TPS family activation/secretion protein |
? | NC_002947 | 1656995 = | 50 (1.010) | coding (1499/1698 nt) | PP_1450 | TPS family activation/secretion protein |
CCTACATCGGCCTGGACCTGGGCTGGGTTCGCACCGCCGAAGGCAAACCGTCACAGCGCCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1657001‑1656936 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgATGTAGGGGCGTATCTCGAAAGGTGGGGCCCAGGTCCGTGGCAGCGCCTGGCTGAACGTATTGCGCCAGACGGCGCTGCTGGCACCGGAGTAAGTGTGCAGACGAAAGCCGCGGACAGCCGAATCG > NC_002947/1656995‑1657120 CCTACATCGGCCTGGACCTGGGCTGGGTTCGCACCGCCGAAGGCAAACCGTCACAGCGCCTGGCCGATGTAGGGGCGTATCTCGAAAGGTGGGGCCCAGGTCCGTGGCAGCGCCTGGCTGAACGTATTGCGCCAGACGGCGCTGCTGGC > 1:58948/1‑149 CATCGGCCTGGACCTGGGCTGGGTTCGCACCGCCGAAGGCAAACCGTCACAGCGCCTGGCCGATGTAGGGGCGTATCTCGAAAGGTGGGGCCCAGGTCCGTGGCAGCGCCTGGCTGAACGTATTGCGCCAGACGGCGCTGCTGGGACCG > 5:130351/1‑149 GGTTCGCACCGCCGAAGGCAAACCGTCACAGCGCCTGGCCGATGTAGGGGCGTATCTCGAAAGGTGGGGCCCAGGTCCGTGGCAGCGCCTGGCTGAACGTATTGCGCCAGACGGCGCTGCTGGGACCGGAGTAAGTGTGCAGACGAAA < 6:130351/148‑1 CAAACCGTCACAGCGCCTGGCCGATGTAGGGGCGTATCTCGAAAGGTGGGGCCCAGGTCCGTGGCAGCGCCTGGCTGAACGTATTGCGCCAGACGGCGCTGCTGGCACCGGAGTAAGTGTGCAGACGAAAGCCGCGGACAGCCGAATCG < 2:58948/149‑1 CCTACATCGGCCTGGACCTGGGCTGGGTTCGCACCGCCGAAGGCAAACCGTCACAGCGCCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1657001‑1656936 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgATGTAGGGGCGTATCTCGAAAGGTGGGGCCCAGGTCCGTGGCAGCGCCTGGCTGAACGTATTGCGCCAGACGGCGCTGCTGGCACCGGAGTAAGTGTGCAGACGAAAGCCGCGGACAGCCGAATCG > NC_002947/1656995‑1657120 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |